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morphic-bio
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data-ingestion-development
Repository to track the internal issues regarding DRACC development and operations
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Create morphic-specific Profile
#47
KociOrges
closed
7 months ago
1
Suggest "Links" as a formalization of entity linking in the schema
#46
ESapenaVentura
opened
10 months ago
0
Update and adapt the metadata-schema publisher to use it for MorPhiC schema
#45
ESapenaVentura
opened
10 months ago
0
deploy MorPhiC's prod env
#44
amnonkhen
closed
7 months ago
2
metadata schema release process
#43
amnonkhen
opened
10 months ago
0
MorPhic data release
#42
dipayan1985
opened
10 months ago
1
Split and curate NW spreadsheet
#41
ESapenaVentura
closed
9 months ago
2
Dataset submission support via provider API
#40
KociOrges
closed
5 months ago
5
Study registration
#39
KociOrges
closed
4 months ago
0
Connect ingest-core to the morphic database
#38
KociOrges
closed
10 months ago
2
Evaluate if Project registration in ingest-core can be reused for Study registration for morphic
#37
KociOrges
closed
10 months ago
1
Provider API for data submissions
#36
KociOrges
opened
10 months ago
2
Prepare documentation on data flow to archives
#35
ESapenaVentura
closed
10 months ago
0
Create schema linter
#34
ESapenaVentura
opened
10 months ago
0
ontologised item w/o ontology label
#31
amnonkhen
closed
10 months ago
2
nested content properties
#32
amnonkhen
opened
11 months ago
1
ingest client for MorPhiC
#30
amnonkhen
closed
4 months ago
1
Investigate relevant fields for Phenotyping types of experiments
#29
gabsie
opened
11 months ago
0
Data Catalogue screen for feedback with NIH
#28
gabsie
closed
11 months ago
1
Organise meetings with DAVs to discuss analysis requirements in schema
#27
ESapenaVentura
closed
10 months ago
2
Research which DUO codes are compatible with MorPhiC
#26
ESapenaVentura
closed
10 months ago
2
morphic-util feedback
#25
ESapenaVentura
closed
4 months ago
0
connect schema servers to morphic.bio domain and verify access
#33
amnonkhen
closed
10 months ago
5
Dataset/Study definition
#24
ESapenaVentura
closed
11 months ago
1
Schema to spreadsheet conversion
#23
ESapenaVentura
closed
1 year ago
0
IGVF and SSPsyGene alignment with DRACC
#22
ESapenaVentura
opened
1 year ago
0
Follow up plan after initial MVP comms
#21
ESapenaVentura
closed
11 months ago
1
Molecular phenotyping
#20
ESapenaVentura
opened
1 year ago
0
Metadata Schema and Documentation
#19
ESapenaVentura
opened
1 year ago
0
Data Upload
#18
ESapenaVentura
opened
1 year ago
0
Track Studies
#17
ESapenaVentura
opened
1 year ago
0
Metadata schema for Study
#16
ESapenaVentura
closed
1 year ago
3
Archiving MorPhiC data
#15
ESapenaVentura
opened
1 year ago
0
Register a Cell Line
#14
ESapenaVentura
opened
1 year ago
0
Metadata schema for Original Cell line
#13
ESapenaVentura
closed
11 months ago
1
Represent the schemas as google sheet specs for easier feedback from DPCs
#12
ESapenaVentura
closed
7 months ago
0
Decision on JSON schema delivery
#11
ESapenaVentura
closed
1 year ago
4
create a bucket for schema files
#10
ESapenaVentura
closed
10 months ago
1
add Isuru and Amnon to morphic's github
#9
ESapenaVentura
closed
1 year ago
0
add Amnon & Enrique to Morphic AWS
#8
ESapenaVentura
closed
1 year ago
1
populate s3 bucket with schema files
#7
ESapenaVentura
closed
10 months ago
1
expose schema bucket as HTTP server - DEV environment
#6
ESapenaVentura
closed
10 months ago
4
Terraform for Morphic setup
#5
ESapenaVentura
closed
8 months ago
2
automated updates of schema changes
#4
ESapenaVentura
closed
4 months ago
7
move morphic tickets to morphic github org
#3
ESapenaVentura
closed
1 year ago
6
documentation for schema process
#2
ESapenaVentura
opened
1 year ago
1
Wrangle an example dataset for MorPhiC
#1
ESapenaVentura
closed
11 months ago
2
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