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mortazavilab
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lapa
Alternative polyadenylation detection from diverse data sources such as 3'-seq, long-read and short-reads.
https://www.biorxiv.org/content/10.1101/2022.11.08.515683v1
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ValueError: Invalid win_type gaussian
#26
sunqiangzai
opened
1 week ago
1
ValueError: new categories must not include old categories
#25
nemitheasura
opened
4 months ago
0
lapa_correct_talon ValueError: Samples in abundance file do not match with read_annot file.
#24
MustafaElshani
opened
7 months ago
0
Workaround for overflow error mentioned in issue #20
#23
leetaiyi
opened
7 months ago
0
Installation error
#22
sagnikbanerjee15
opened
11 months ago
5
AssertionError: Can only do stranded operations when both PyRanges contain strand info
#21
leli-li
opened
11 months ago
5
pyrange error "ValueError: all elements of `new_shape` must be non-negative"
#20
ArthurDondi
opened
1 year ago
11
error: "Only a column name can be used for the key in a dtype mappings argument"
#19
emaxortiz
opened
1 year ago
0
Refining transcript 3' and 5' ends with LAPA
#18
MustafaElshani
opened
1 year ago
3
Pychopper
#17
MustafaElshani
closed
1 year ago
3
Value error need at least one array to concatenate
#16
Priyankanator
opened
1 year ago
5
AttributeError: module 'numpy' has no attribute 'int'
#15
MustafaElshani
closed
1 year ago
2
other PolyA motifs
#14
MustafaElshani
closed
1 year ago
6
Support for non stranded paired ended data
#13
margaretc-ho
closed
1 year ago
5
fixes #11
#12
MuhammedHasan
closed
2 years ago
0
latest version issue: RuntimeError: The entries you tried to add are out of order, precede already added entries, or otherwise use illegal values. Please correct this and try again.
#11
peterthorpe5
closed
2 years ago
5
supplementary figure updates
#10
MuhammedHasan
closed
1 year ago
0
output files
#9
peterthorpe5
closed
2 years ago
3
Fix sorted-nearest version 0.0.33
#8
peterthorpe5
closed
2 years ago
2
tss counting and clustering
#7
MuhammedHasan
closed
2 years ago
1
init update
#6
MuhammedHasan
closed
2 years ago
1
testfix-march9
#5
MuhammedHasan
closed
2 years ago
0
Develop
#4
MuhammedHasan
closed
2 years ago
0
make alignment csv reading more flexible
#3
Hoeze
closed
2 years ago
1
gtf correction, improved counting
#2
MuhammedHasan
closed
2 years ago
0
Update setup.py
#1
MuhammedHasan
closed
2 years ago
0