issues
search
mpi2
/
impc-etl
IMPC ETL Process
Apache License 2.0
2
stars
6
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Fix MPChooser deps
#223
ficolo
closed
2 years ago
0
Fix load workflow file
#222
ficolo
closed
2 years ago
0
Temporary fix to EOSC Life API datasource generator
#221
ficolo
closed
2 years ago
0
Fix Stats REsults Mapper app_options
#220
ficolo
closed
2 years ago
0
Fix Stats REsults Mapper output
#219
ficolo
closed
2 years ago
0
Fix ImpressToParameterMapper task
#218
ficolo
closed
2 years ago
0
Migrate StatsResultsMapper to use PySparkTask, add a new Alleleref ex…
#217
ficolo
closed
2 years ago
0
Update ImpressToParameterMapper to use PySparkTask
#216
ficolo
closed
2 years ago
0
Add deploy_mode to OntologyTermHierarchyExtractor input
#215
ficolo
closed
2 years ago
0
Adding HDFS read for cluster OntologyTermHierarchyExtractor
#214
ficolo
closed
2 years ago
0
Adding OntologyTermHierarchyExtractor to main
#213
ficolo
closed
2 years ago
0
Adding StatisticalAnalysisOutputMapper to main module
#212
ficolo
closed
2 years ago
0
Change open stats extractor to us JSON files instead of PG/DB
#211
ficolo
closed
2 years ago
0
Fix pain XMl generator, add more partitions to derivation task
#210
ficolo
closed
2 years ago
0
Fix 3i images for imaging pipeline input
#209
ficolo
closed
2 years ago
0
Repartition data before applying parameter derivations
#208
ficolo
closed
2 years ago
0
Fix app options for stats_pipeline_input_mapper
#207
ficolo
closed
2 years ago
0
Fix output of some tasks
#206
ficolo
closed
2 years ago
0
Fix JAX colonies on PWG data
#205
ficolo
closed
2 years ago
0
Remove MPChooser temporarly from ImpcPreStatisticalAnalysis deps
#204
ficolo
closed
2 years ago
0
Remove OntologyTermHierarchyExtractor temporarly from extract module
#203
ficolo
closed
2 years ago
0
Update Pipeline Core Loader to use new deps
#202
ficolo
closed
2 years ago
0
Finish PWG processing, changes to Makefile
#201
ficolo
closed
2 years ago
0
Adding different date formats support PWG data
#200
ficolo
closed
2 years ago
0
Adding task to group pre statistical analysis jobs
#199
ficolo
closed
2 years ago
0
Restructure luigi tasks and documentation
#198
ficolo
closed
2 years ago
0
Documenting task to add BW and Age of experiment to experimental data
#197
ficolo
closed
2 years ago
0
Restructure and document Specimen Cleaning tasks
#196
ficolo
closed
2 years ago
0
Finish Experiment cleaner restructure and documentation
#195
ficolo
closed
2 years ago
0
Re-structuring Experiment Cleaner task WIP
#194
ficolo
closed
2 years ago
0
Colony cleaning task re-structure to PySpark task
#193
ficolo
closed
2 years ago
0
Adding documentation and restructure Colony. Clean task
#192
ficolo
closed
2 years ago
0
Document Ontology data Extraction tasks
#191
ficolo
closed
2 years ago
0
Adding documentation and re-structuring code.
#190
ficolo
closed
2 years ago
0
Renaming normalize tasks directory to 'transform'
#189
ficolo
closed
2 years ago
0
Adding MP HP matches to MP Core loader
#188
ficolo
closed
2 years ago
0
Check the parameters annotation flag to generate manual hits
#187
ficolo
closed
9 months ago
0
Fix missing anatomy terms for embryo expression parameters
#186
ficolo
closed
3 years ago
0
Change mongodb id to mgi acc
#185
ficolo
closed
3 years ago
0
Adding _class fiedl to gene_search collection
#184
ficolo
closed
3 years ago
0
Adding genes_search collection to MongoDB
#183
ficolo
closed
3 years ago
0
Adding genes_search collection to MongoDB
#182
ficolo
closed
3 years ago
0
Adding genes_search collection to MongoDB
#181
ficolo
closed
3 years ago
0
IMPC API: Create Gene Index on MongoDB
#180
ficolo
closed
3 years ago
0
Fix intermediate_mp_id and intermediate_mp_term
#179
ficolo
closed
3 years ago
0
Adding intermediate MP terms to stats_results with no hit
#178
ficolo
closed
3 years ago
0
Adding case insensitive flag to date of sacrifice parsing
#177
ficolo
closed
3 years ago
0
Change date parsing strategy for Date of sacrfice
#176
ficolo
closed
3 years ago
0
Adding special rule to mark EYE_003/EYE_092_002 stats results as NotP…
#175
ficolo
closed
3 years ago
0
Remove EYE_003/EYE_092_002 stats results filter
#174
ficolo
closed
3 years ago
0
Previous
Next