mskcc / pluto-cwl

CWL workflows for helix filter scripts
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Add ramMax to cbioportal CWL #30

Closed allanbolipata closed 3 years ago

allanbolipata commented 3 years ago

LSF was killing these jobs; it looks like this one tool can hit the 8 GB limit.

We should plan for this better (i.e., my "fix" is really just a workaround) - perhaps add a limiter to the wrapper script this tool is invoking - but since this is the first time this has happened, this bump from 8 GB to 16 GB should be ok for now.

I branched off of master; it looks like dev didn't get the updated README commit, that's why it's included in this PR.