add OncoKB annotation to maf output - Githubissues

mskcc / pluto-cwl

CWL workflows for helix filter scripts

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add OncoKB annotation to maf output #60

Open stevekm opened 3 years ago

stevekm commented 3 years ago

Migrate issue from here;

https://github.com/mskcc/helix_filters_01/issues/44

Need to add OncoKB annotations to output maf files

OncoKb

https://www.oncokb.org/

Example annotation script

https://github.com/oncokb/oncokb-annotator/blob/master/MafAnnotator.py