search

mskcc / tempo

CCS research pipeline to process WES and WGS TN pairs
https://cmotempo.netlify.com/
12 stars 5 forks source link

Create a germline module which does not use tumor BAMs #462

Open evanbiederstedt opened 5 years ago

evanbiederstedt commented 5 years ago

We should create the functionality to do germline calls without tumor genotyping.

This is a backburner issue, but something to think about.

evanbiederstedt commented 5 years ago

I think a separate script here makes the most sense.

Easy peasy.