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mskilab-org
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JaBbA
MIP based joint inference of copy number and rearrangement state in cancer whole genome sequence data.
MIT License
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./Rcplex2.h:4:10: fatal error: 'ilcplex/cplex.h' file not found
#105
dhanusha2504
opened
3 months ago
4
Using deprecated/undocumented igraph functions
#104
szhorvat
opened
4 months ago
0
Ensembl Connectivity Warning
#103
qhauck16
opened
4 months ago
1
无法安装cplex
#102
wwhwwxlz
opened
4 months ago
1
要安装gurobi或者 CPLEX Studio才能使用jabba？
#101
wwhwwxlz
closed
4 months ago
2
Error in Aggregate.Formula
#100
hraeder41
opened
6 months ago
4
events() function in gGnome
#99
tanasa
closed
7 months ago
1
Update: Updates README.md with latest Docker image
#98
tanubrata
closed
9 months ago
1
Add jba executable to your Path
#97
ryao-mdanderson
opened
10 months ago
11
Fixing a bug where the CPLEX check was forcefully implemented even when using Gurobi
#96
tanubrata
closed
10 months ago
1
Added a fix for CPLEX and gurobi overlap check
#95
tanubrata
closed
11 months ago
0
JaBbA installation error
#94
mandronescu
closed
10 months ago
7
Fixes failure due to CPLEX not connected with gGnome and Sequenza installation.
#93
tanubrata
closed
11 months ago
0
Error running test example
#92
p-smirnov
closed
11 months ago
1
Sequenza has been removed from CRAN
#91
p-smirnov
closed
11 months ago
1
failed to install 'unknown package' from GitHub.
#90
ryao-mdanderson
opened
1 year ago
13
drop.chr param
#89
MaxLChao
closed
11 months ago
0
CPLEX or Gurobi optimizers
#88
tanasa
closed
11 months ago
3
double chromosomes notation in JaBbA's output
#87
l0ka
closed
11 months ago
1
Error in replCmat4
#86
kmavrommatis
opened
1 year ago
0
Error in aggregate.formula(...)
#85
kmavrommatis
closed
11 months ago
1
Zc dev
#84
zining01
closed
1 year ago
0
Zc dev
#83
zining01
closed
1 year ago
0
fix unit test failure in ra.merge
#82
zining01
closed
1 year ago
0
update customparams in call to ramip_stub
#81
zining01
closed
1 year ago
0
Compatibility with Gurobi as alternative to CPLEX
#80
pblaney
closed
1 year ago
2
Expected output of toy example
#79
williamphu
closed
11 months ago
1
Zc dev
#78
zining01
closed
1 year ago
0
update DESCRIPTION and read.junctions
#77
zining01
closed
1 year ago
0
fix jba
#76
zining01
closed
1 year ago
0
add codecov
#75
zining01
closed
1 year ago
0
Qc
#74
zining01
closed
1 year ago
0
merge fork
#73
zining01
closed
1 year ago
0
[Feature Request] Docker Installation
#72
grasskind
closed
1 year ago
3
merge zining01 fork
#71
zining01
closed
1 year ago
0
Trying to run test example... failing with write.table() error?
#70
roseisgold
closed
11 months ago
7
khadi_dev
#69
kevinmhadi
opened
2 years ago
0
Error in the final step (R): 'by' appears to evaluate to column names but isn't c() or key()'
#68
Giuseppe1995
closed
11 months ago
1
Added QC Code
#67
jsam356
closed
1 year ago
0
Gurobi
#66
zining01
closed
2 years ago
0
installation with Gurobi not work
#65
banlangen523
closed
2 years ago
2
Kevinmhadi khadi dev
#64
zining01
closed
2 years ago
0
Gurobi
#63
zining01
closed
2 years ago
0
Annotate segstats and asegstats with ncn field if the normal segmentation was provided as input
#62
ShaiberAlon
opened
2 years ago
0
exposed max.threads and max.mem parameters for ILOG_CPLEX file
#61
kevinmhadi
closed
2 years ago
1
fix bed file cov input and jba defaults
#60
zining01
closed
2 years ago
0
fix jba missing default bug
#59
zining01
closed
2 years ago
0
read.junctions
#58
zining01
closed
2 years ago
0
read.junctions modification
#57
kevinmhadi
closed
2 years ago
1
transform with rel2abs before saving jabba.simple.png plot
#56
ShaiberAlon
closed
2 years ago
0
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