NimbleMiner

NimbleMiner: a software that allows clinicians to interact with word embedding models (skip-gram models- word2vec and Glove) to rapidly create lexicons of similar terms.

To run the application, please follow these steps:

1. Copy all files and folders from NimbleMiner repository

2. Install base software:

   • Download and install the last version of R (3.5.0 or later)
   • Download and install the last version of RStudio (1.1.447 or later)
   • Download and install devtools::
   • o On windows: Rtools (35 or last recommended version) - Change the default path ( C:\RBuildTools ) to C:\Rtools
   • On Mac: Xcode command line tools.

3. Restart the computer.

4. Install packages:

• Open script installer/installer.R in RStudio
• Run script with help of button "Source"
• Wait till all packages will be installed
• Restart R session (or restart RStudio)

4. Open NimbleMiner.R in RStudio and run it by the button "Run App"