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mwang87 / ReDU-MS2-GNPS

User interface to reanalyze and explore all public data in Metabolomics Public Data
https://redu.ucsd.edu/
MIT License
11 stars 9 forks source link

Additional ReDu terms requested #245

Closed RobertJansen80 closed 2 years ago

RobertJansen80 commented 2 years ago

To upload some data to MassIVE, I would like to request entries fot the follwoing NCBITaxonomies

Ans as extraction solvent

Also, would it be possible to include the Agilent 6546 QTOF to the instrument list?

Thanks!

Robert Jansen

mwang87 commented 2 years ago

Hi @RobertJansen80 Sorry for the delay, its been a busy few months as I'm transition to my new faculty position at UCR. This will include a migration of ReDU and one thing I want to do is a bit of a refactor so that we can make the terms more extensible so even you can propose additions so it becomes way more responsive. Once things are settled later in the summer, lets work together to get this done!

RobertJansen80 commented 2 years ago

Hi Ming,

Sounds good. Good luck with starting your lab!

Robert

Van: Ming Wang @.> Verzonden: donderdag 30 juni 2022 00:07 Aan: mwang87/ReDU-MS2-GNPS @.> CC: Jansen, R.S. (Robert) @.>; Mention @.> Onderwerp: Re: [mwang87/ReDU-MS2-GNPS] Additional ReDu terms requested (Issue #245)

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alan-jarmusch commented 2 years ago

I've updated the metadata to include your organisms as well as the solvent and mass spec terms below. 'acetonitrile-methanol-water (2:2:1)' 'Agilent 6546 QTOF|not available'