request for addition to Lexicon (MicrobeMASST)

mwang87 / ReDU-MS2-GNPS

User interface to reanalyze and explore all public data in Metabolomics Public Data

https://redu.ucsd.edu/

MIT License

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request for addition to Lexicon (MicrobeMASST) #256

Open LipidA-IDE opened 2 years ago

LipidA-IDE commented 2 years ago

Hi, some of the terms are not available in the template and hence would like to request for their addition.

Bacteria species Escherichia coli K-12 W3110 Tax. ID: 316407 Klebsiella pneumoniae ATCC10031 Staphylococcus aureus ATCC29213 Mycobacterium bovis BCG str. Denmark 1331. Tax. ID: 998090

Instrument type SCIEX TripleToF 6600

Extraction solvents ACN:MeOH:H2O 2:2:1 CHCl3:MeOH 1:2

thank you!

alan-jarmusch commented 2 years ago

\can you please provide the taxID|name in this format '43656|Pseudoalteromonas denitrificans'

Instrument type SCIEX TripleToF 6600 ='TripleTOF 6600|MS:1002533'

Extraction solvents ACN:MeOH:H2O 2:2:1 = 'acetonitrile-methanol-water (2:2:1)' CHCl3:MeOH 1:2 = 'chloroform-methanol (1:2)',