issues
search
nathanin
/
micron2
0
stars
0
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Save current rendered image button
#36
nathanin
opened
2 years ago
0
Image flip / rotate buttons
#35
nathanin
opened
2 years ago
0
Viewer freezes if window is resized while updating the image plot
#34
nathanin
closed
2 years ago
1
Parallel write to hdf5
#33
nathanin
closed
2 years ago
1
Saturate before quantizing images stored in hdf5 datasets
#31
nathanin
closed
3 years ago
1
Characterize performance of cell gating --> classification workflow
#30
nathanin
opened
3 years ago
0
Image montage tool
#29
nathanin
closed
3 years ago
1
Rewrite viewer and MoCo training
#28
nathanin
closed
3 years ago
0
Switching image region is buggy
#27
nathanin
closed
2 years ago
1
Benchmark streaming from hdf5
#26
nathanin
closed
2 years ago
1
Switching annotation column not behaving if a cluster is selected for highlighting
#25
nathanin
opened
3 years ago
0
Output plots / images from the viewer
#24
nathanin
closed
2 years ago
0
Scatter/image viewer scale bar and legend
#23
nathanin
opened
3 years ago
0
MoCo/unsupervised training efficiency
#22
nathanin
opened
3 years ago
4
reset everything when we switch the slide
#21
nathanin
opened
3 years ago
0
Viewer annotation mode
#20
nathanin
closed
2 years ago
1
do not quantize viewer image until necessary
#19
nathanin
closed
3 years ago
1
remove dependency on pytiff
#18
nathanin
closed
2 years ago
1
add sklearn alternative to RAPIDS NearestNeighbors
#17
nathanin
closed
3 years ago
0
Hpc
#16
nathanin
closed
3 years ago
0
Add macOS branch
#15
nathanin
closed
3 years ago
1
channel mean value normalization between slides
#14
nathanin
closed
3 years ago
1
remove large files like jupyter notebooks with images from history
#13
nathanin
opened
3 years ago
0
dataset info via rich trees
#12
nathanin
opened
3 years ago
0
refactor `pull_nuclei` to get mean values directly from raw uint16 preprocessed data
#11
nathanin
closed
3 years ago
1
add background estimation during dataset create
#10
nathanin
closed
3 years ago
1
Allow tagging cells in viewer scatter plot
#9
nathanin
closed
3 years ago
1
fix tqdm output spam on non-TTY
#8
nathanin
closed
3 years ago
0
Hpc
#7
nathanin
closed
3 years ago
0
Fix tqdm output when running in job mode on a cluster
#6
nathanin
closed
3 years ago
1
fix again uint16 trunc
#5
nathanin
closed
3 years ago
0
fix uint16 truncation
#4
nathanin
closed
3 years ago
0
Improvements to visualization
#3
nathanin
opened
3 years ago
1
improve dataset creation from preprocessed stack
#2
nathanin
closed
3 years ago
0
Add learning rate decay to MoCo training funtion
#1
nathanin
closed
3 years ago
1