This MATLAB code was used as part of the work presented in
Prateek Katare, Navchetan Awasthi, Aravind Venukumar, Sai Siva Gorthi, “Low-cost, continuous motion imaging, computationally augmneted whole slide imager for digital pathology,”(Journal of Special Topics In Quantum Electronics) (in review)
Please cite the following papers if you find the codes helpful:
Navchetan Awasthi, Prateek Katare, Sai Siva Gorthi and Phaneendra K. Yalavarthy, "Guided Filter based Image enhancement for focal error compensation in low cost automated histopathology microscopic system," Journal of Biophotonics 2020, 13.11: e202000123.
Prateek Katare, Navchetan Awasthi, Aravind Venukumar, Sai Siva Gorthi, “Low-cost, continuous motion imaging, computationally augmneted whole slide imager for digital pathology,”(Journal of Special Topics In Quantum Electronics), 2021.
**The raw measurement data for the images is not provided and can be requested.
***Please contact if you find any mistakes or if you need any help regarding the codes.
Matlab Codes: (requires guided filter toolbox and matlab)
The main file is the demo code.
Please load the image and then run the demo code.
The dependencies are included in the package.