ncbi datasets issues - Githubissues

ncbi / datasets

NCBI Datasets is a new resource that lets you easily gather data from across NCBI databases.

https://www.ncbi.nlm.nih.gov/datasets

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Download error for list of WP accessions

#372 ericcox1 opened 5 months ago
11
Release updated docs for 16.18.0

#371 BradHolmes closed 5 months ago
0
Extra info in 404 response if assembly exist but not included in the datasets API

#370 manulera closed 5 months ago
6
Add publication info to assembly or BioProject fields.

#369 conchoecia opened 5 months ago
2
Partial sequence download

#368 mkdevesh closed 5 months ago
1
Getting incorrect error: "186538 appears to be an invalid tax name"

#367 corneliusroemer closed 5 months ago
1
Use ISO date formatting for date input

#366 ammaraziz closed 5 months ago
3
Flag obsolete records in dataset

#365 joverlee521 closed 5 months ago
2
Minor typo for "documentaion" in unzipped datasets output

#364 d33bs closed 5 months ago
4
Release updated docs for 16.17.1

#363 BradHolmes closed 6 months ago
0
`--debug` dumps a lot of binary to stderr

#362 corneliusroemer closed 6 months ago
1
Release updated docs for 16.17.0

#361 BradHolmes closed 6 months ago
0
Getting error "Error: Internal error (invalid zip archive). Please try again." Take 2

#360 corneliusroemer closed 5 months ago
27
Permissions of download not default of user

#359 joegeorgeson opened 6 months ago
1
datasets summary crashes when called on a soon to be renamed genus Candida/Metschnikowiaceae

#358 Jtrachsel closed 6 months ago
2
Release updated docs for 16.16.0

#357 BradHolmes closed 6 months ago
0
Getting error Error: Internal error (invalid zip archive). Please try again

#356 corneliusroemer closed 6 months ago
9
Missing `assembly_info.submitter` field (assembly record)

#355 muffato closed 6 months ago
3
Release updated docs for 16.14.0

#354 BradHolmes closed 6 months ago
0
`dataformat` errors on non-latest version: `Dataformat doesn't recognize this input: Error: proto: (line 10:7): unknown field "uncompressedMd5Hex"`

#353 corneliusroemer closed 6 months ago
4
Release updated docs for 16.13.0

#352 BradHolmes closed 6 months ago
0
Unable to download PRJNA798058

#351 icyjayd closed 6 months ago
4
Release updated docs for 16.12.1

#350 BradHolmes closed 7 months ago
0
Release updated docs for 16.12.0

#349 BradHolmes closed 7 months ago
0
Accessing annotation from nuccore sequences

#348 manulera closed 7 months ago
1
Many REST API examples fail on the documentation page

#347 ialbert opened 7 months ago
1
Unable to locate the source code

#345 ialbert closed 7 months ago
4
Error in download

#344 edtankian97 closed 7 months ago
2
Release updated docs for 16.10.2

#343 BradHolmes closed 7 months ago
0
GenBank or RefSeq

#342 mkdevesh closed 7 months ago
1
invalid or unsupported assembly accession: NC_001740

#341 ggl2151 closed 7 months ago
1
Limited number of genome downloads for some taxon

#340 mkdevesh closed 7 months ago
4
Release updated docs for 16.10.1

#339 BradHolmes closed 7 months ago
0
Include more metadata from genbank files in virus reports, e.g. `/note` and `/strain`

#338 corneliusroemer closed 7 months ago
5
Make more publication metadata available via `datasets download virus genome taxon 186538`

#337 corneliusroemer closed 7 months ago
2
`Submitter Names` lack spaces in `dataformat tsv virus-genome` compared to genbank file serialization

#336 corneliusroemer opened 8 months ago
1
Release updated docs for 16.10.0

#335 BradHolmes closed 8 months ago
0
request for changelog - do not understand release notes

#334 conchoecia closed 8 months ago
1
Release updated docs for 16.9.0

#333 BradHolmes closed 8 months ago
0
Create issue templates

#332 BradHolmes closed 8 months ago
1
Truncated FNAs on non-dehydrated downloads of large datasets, please make it more clear that non-dehydrated downloads are dangerous

#331 joeweaver opened 8 months ago
1
Release updated docs for 16.8.1

#330 BradHolmes closed 8 months ago
0
datasets Version 16.7?

#329 balags1 closed 8 months ago
2
`ncbi_dataset/data/data_report.jsonl` sometimes missing

#328 bernt-matthias closed 8 months ago
2
Feature Request: bgzip option

#327 genignored closed 8 months ago
1
--geo-location flag runs into invalid zip archive error

#326 joverlee521 opened 8 months ago
6
"Large multi-isolate projects" field in `datasets summary genome` / `dataformat tsv` ?

#325 paulimer closed 8 months ago
4
Versioning and backwards compatibility

#324 muffato closed 8 months ago
2
Order of output datasets

#323 alvanuffelen closed 8 months ago
1
Release updated docs for 16.6.0

#322 BradHolmes closed 8 months ago
0

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