ncbi magicblast issues - Githubissues

ncbi / magicblast

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truncated file error

#59 jeremysutherland opened 3 weeks ago
4
Error to install requirements.txt

#58 Completex closed 3 weeks ago
2
missing scaffold names on sam header

#57 cst-rmrz closed 4 months ago
2
magicblast can't parse the header of database

#56 Rinoahu closed 10 months ago
2
Release notes for 1.7.2

#55 boratyng closed 1 year ago
0
Mistakes on small introns

#54 sunriseTM opened 1 year ago
3
Release 1.7.1

#53 boratyng closed 1 year ago
0
Error while running magicblast

#52 pablomics-star opened 1 year ago
1
Release notes for 1.7.0

#51 boratyng closed 1 year ago
0
Use magicblast to map an experiment in the SRA reporitory

#50 sabina-llr opened 1 year ago
12
Use NCBI SRA repository ( NCBI Magic-BLAST RNA-seq mapping tool)

#49 joseailtoncruz opened 1 year ago
9
Distant homology searches

#48 manu-script closed 1 year ago
2
Can not produce spliced alignments of whole transcript

#47 LalitNM closed 1 year ago
4
Removed Gemfile and Gemfile.lock

#46 boratyng closed 2 years ago
0
Bump nokogiri from 1.13.4 to 1.13.6 in /docs

#45 dependabot[bot] closed 2 years ago
0
Bump nokogiri from 1.13.3 to 1.13.4 in /docs

#44 dependabot[bot] closed 2 years ago
0
Filtering MagicBLAST Ouput to get Unmapped Pairs

#43 bioinfoMMS closed 1 year ago
10
Bump commonmarker from 0.17.13 to 0.23.4 in /docs

#42 dependabot[bot] closed 2 years ago
0
Updated gem versions

#41 boratyng closed 2 years ago
0
Bump nokogiri from 1.12.5 to 1.13.3 in /docs

#40 dependabot[bot] closed 2 years ago
0
Meaningful MAPQ values would be excellent.

#39 JohnUrban opened 2 years ago
4
Bump nokogiri from 1.11.7 to 1.12.5 in /docs

#38 dependabot[bot] closed 2 years ago
0
Updated kramdown

#37 boratyng closed 2 years ago
0
Bump nokogiri from 1.10.10 to 1.11.7 in /docs

#36 dependabot[bot] closed 2 years ago
0
Updated jekyll libraries

#35 boratyng closed 2 years ago
0
ftp:// -> https:// in footer

#34 boratyng closed 2 years ago
0
Update version in Bioconda

#33 manu-script closed 3 years ago
3
Write down read qual from the `fastq` input into the `sam` output file?

#32 y9c closed 1 year ago
4
Magicblast do not deal with short reads correctly.

#31 y9c closed 1 year ago
13
Updates for release 1.6.0

#30 boratyng closed 3 years ago
0
Another update for kramdown

#29 boratyng closed 3 years ago
0
Security update

#28 boratyng closed 3 years ago
0
Updated github-pages dependencies

#27 boratyng closed 3 years ago
0
Fix security vulnerabilities

#26 christiam closed 3 years ago
0
Splice alignment for prokaryotes genome

#25 StephenLi55 closed 3 years ago
1
magicblast against nt database

#24 yeroslaviz closed 3 years ago
1
request fo .gz inputs (fastq.gz especially)

#23 FTouzain closed 3 years ago
2
More download options and feedback

#22 boratyng closed 3 years ago
0
-fr and -rf flags for strand specific RNA-seq

#21 asethi-1 opened 4 years ago
3
Added a link to NCBI license file

#20 boratyng closed 4 years ago
0
using magicblast to map transcriptome to genome

#19 000generic closed 3 years ago
3
Bump rubyzip from 1.2.2 to 2.2.0 in /docs

#18 dependabot[bot] closed 4 years ago
0
Bump nokogiri from 1.10.4 to 1.10.8 in /docs

#17 dependabot[bot] closed 4 years ago
0
fasta header handling, non-canonical splice site detection, strand information coding

#16 HegedusB closed 3 years ago
3
problems with really short exons (10-6 bp)

#15 HegedusB opened 4 years ago
4
Feature request: output .fna file of reads (not) matching the database

#14 colinbrislawn closed 3 years ago
3
Updated jekyll dependencies: nokogori to version 1.10.4

#13 boratyng closed 4 years ago
0
taking longer and using more memory than expected

#12 jdmontenegro opened 4 years ago
2
Confusion of output

#11 Edison2021 closed 4 years ago
2
Release notes for version 1.5.0

#10 boratyng closed 4 years ago
0