Combine structural variation outputs from long sequencing reads into a superior call set
Last updates: 22/04/22 version 2.3
Any issues/requests/problems/comments that are not yet addressed on this page can be posted on Github issues and I will try to reply the same day.
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nicolasdierckxsens at hotmail dot com
Perl
Usage:
perl combiSV2.1.pl -pbsv
This is the combined standard vcf output
This is a simplified vcf output that can be used as input for Sim-it
For each VCF input, an output file of the SVs that were retained is given.