Convert SE --> SCE --> Seurat

neurogenomics / scKirby

Automated ingestion and conversion of various single-cell data formats, within and across species

https://neurogenomics.github.io/scKirby/

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Convert SE --> SCE --> Seurat #1

Closed bschilder closed 1 year ago

bschilder commented 3 years ago

Seurat::as.Seurat() doesn't know how to convert SummarizedExperiments directly to Seurat objects. Instead, will have to convert to SingleCellExperiment as an intermediate first.