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neurogenomics / scKirby

Automated ingestion and conversion of various single-cell data formats, within and across species
https://neurogenomics.github.io/scKirby/
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Saving loom files #3

Closed bschilder closed 1 year ago

bschilder commented 1 year ago

Saving loom files can be tricky.

Seems like loomR was deprecated in favor of SeuratDisk, so should move all functions over to the latter.

https://github.com/satijalab/seurat/issues/4514