nextflow-io rnaseq-nf issues

nextflow-io / rnaseq-nf

A proof of concept of RNAseq pipeline

Apache License 2.0

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issues

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Workflow outputs (second preview)

#30 bentsherman opened 3 days ago
1
Conda config: Remove defaults

#29 ewels closed 2 weeks ago
0
Add `-profile mamba`

#28 ewels closed 2 weeks ago
1
Workflow outputs (first preview)

#27 bentsherman opened 6 months ago
17
Static types

#26 bentsherman opened 7 months ago
0
Error GCP/S tutorial

#25 amnahsiddiqa opened 10 months ago
0
Annotation API

#24 bentsherman closed 7 months ago
12
Fix Dockerfile for multiqc vs new python

#23 marcodelapierre closed 1 year ago
7
Issue with multiqc installation with micromamba

#22 marcodelapierre closed 1 year ago
10
Need to build new container image

#21 marcodelapierre closed 1 year ago
6
Add conda to PATH

#20 marcodelapierre closed 1 year ago
0
Update software dependencies and fix broken JSON schema

#19 drpatelh closed 1 year ago
1
Fix Nextflow schema file

#18 ewels closed 1 year ago
3
Error while running nf file with docker image.

#17 srinkadatta opened 1 year ago
0
Add the mermaid diagram for beginner-friendliness

#16 abhi18av closed 2 years ago
0
ChangeModulePATH_andrmConda

#15 chriswyatt1 closed 2 years ago
6
Update parameter schema to work with nf-core/tools

#14 drpatelh closed 2 years ago
0
`kuberun` doesn't put data into the right place

#13 olgabot opened 2 years ago
2
Use always copy mode at publishDir

#12 jordeu closed 2 years ago
0
Fix `demo.nf`

#11 melissachang closed 2 years ago
9
Add Azure batch example to the config

#10 xmzhuo closed 2 years ago
1
removed duplicate "the"

#9 molecules closed 3 years ago
0
removed duplicate "the"

#8 molecules closed 3 years ago
0
Running on M1 macs

#7 f6v opened 3 years ago
6
Error when running GCP tutorial

#6 DenisSch closed 3 years ago
4
Use modules or not

#5 markgene opened 4 years ago
1
Add Google Location

#4 moschetti closed 4 years ago
3
added singularity.autoMounts to config

#3 marcodelapierre closed 1 year ago
4
Code to summarize quant.sf data

#2 tamuanand opened 5 years ago
0
salmon quant for paired-end reads?

#1 DoaneAS closed 7 years ago
4