Closed uee9 closed 4 months ago
thanks a lot for flagging this. we'll update the dataset soon!
should be fixed once https://github.com/nextstrain/nextclade_data/pull/191 is released.
Thanks, Cc-ing Norman here so he’s aware.
Best, Matt
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From: Richard Neher @.> Sent: Tuesday, April 16, 2024 5:08:01 PM To: nextstrain/nextclade_data @.> Cc: Wersebe, Matthew (CDC/NCIRD/ID) (CTR) @.>; Author @.> Subject: Re: [nextstrain/nextclade_data] Latest flu_h1n1_na module is missing NA subclade "B" (Issue #187)
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should be fixed once #191https://github.com/nextstrain/nextclade_data/pull/191 is released.
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Hi There,
The nextclade tree and training set for H1N1pdm09 NA set appears to be missing subclade B, which circulated from ~2018-2020. The current tree available on the online version goes from A.1.1 directly into B.1.
Overall, this is a relatively minor issue but I suspect the exclusion of B in the training set is a bug. Thanks.