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nolanlab
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citrus
Citrus Development Code
GNU General Public License v3.0
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Marker names in plots
#31
cjla87
closed
10 years ago
2
Precluster result should be called clustering result
#30
rbruggner
closed
9 years ago
1
Add date to runCitrus.R file
#29
rbruggner
opened
10 years ago
0
E-mail user when analysis is done
#28
rbruggner
opened
10 years ago
0
"No thresholds for SAM" error
#27
esimonds
closed
10 years ago
4
Add ability to re-extract features without re-running clustering
#26
rbruggner
closed
10 years ago
1
Error message when passing snowCluster to citrus.preCluster function
#25
rbruggner
closed
10 years ago
1
Make cluster graph plots dynamic sizes based on minimum cluster size
#24
rbruggner
closed
10 years ago
1
Export numerical bounds of cluster definitions
#23
rbruggner
opened
10 years ago
0
Export significant clusters as separate FCS files
#22
rbruggner
closed
9 years ago
1
Error in fcs_text_parse
#21
cjla87
closed
10 years ago
2
Automatically use clustering and transform arguments from citrus.preClustuster object in citrus.mapFileDataToClustering
#20
rbruggner
opened
10 years ago
0
Move from SNOW to multicore package for parallel executions
#19
rbruggner
closed
10 years ago
2
change clusterColumns / emdColumns / medianColumns argument names
#18
rbruggner
closed
10 years ago
1
Refactor medianColumns / emdColumns argument into a single "functionalMarkers" argument
#17
rbruggner
closed
9 years ago
1
Add parallel support into citrus.endpointRegress function
#16
rbruggner
opened
10 years ago
0
Extract and return condition-specific values for difference features
#15
rbruggner
opened
10 years ago
0
EMD features crash when CCM contains single condition analysis
#14
rbruggner
opened
10 years ago
0
Use human readable names for channels in feature plots
#13
rbruggner
closed
10 years ago
1
Add SAM support for Survival Data
#12
rbruggner
closed
10 years ago
0
Only calculate SAM model for final model if CV Clustering is run
#11
rbruggner
closed
10 years ago
1
Support reanalysis by way of calculating new features and re-running regression
#10
rbruggner
opened
10 years ago
0
Support continuous value regression
#9
rbruggner
opened
10 years ago
0
Output text file with values of significant features for each sample
#8
rbruggner
closed
10 years ago
1
Use human-readable names for parameter plots (instead of measurement channel)
#7
rbruggner
closed
10 years ago
1
Allow y-axis in cluster density plots to scale independently for each parameter
#6
rbruggner
closed
10 years ago
1
Update FAQ documentation about compiling multithreaded version to use devtools to install
#5
rbruggner
closed
10 years ago
1
Make Clustering, Transform, and Median marker selection as checkboxes instead of select lists.
#4
rbruggner
closed
10 years ago
1
Support multinomial classification
#3
rbruggner
closed
10 years ago
2
Add SAM Support
#2
rbruggner
closed
10 years ago
1
Check that specified column and median values are in file
#1
rbruggner
closed
10 years ago
1
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