notmatthancock pylidc issues

notmatthancock / pylidc

An object relational mapping for the LIDC dataset using sqlalchemy.

https://pylidc.github.io

Other

105 stars 41 forks source link

issues

Newest

Newest Most commented Recently updated Oldest Least commented Least recently updated

ValueError: The length of the pixel data in the dataset (495628 bytes) doesn't match the expected length (524288 bytes). The dataset may be corrupted or there may be an issue with the pixel data handler.

#73 RyanCHEN-Vault closed 3 weeks ago
0
Addressing the Numpy 1.20 deprecation error

#72 Emvlt opened 3 months ago
0
Addressing Numpy 1.20 deprecation error

#71 Emvlt closed 3 months ago
1
Compatibility with Py312 and Numpy2

#70 maxme1 closed 5 months ago
1
Fix deprecated numpy dtype

#69 function2-llx opened 6 months ago
2
Majorly slow dataloader using pylidc

#68 joangog opened 7 months ago
2
centroid to physical coordinates

#67 longchingkwok331 opened 7 months ago
1
added ClusterError exception.

#66 kyriakstrat closed 5 months ago
1
Annotation slice number

#65 longchingkwok331 closed 7 months ago
2
Fix np.int is deprecated bug

#64 caokls closed 5 months ago
1
modify for more recent version of numpy

#63 vankhoa21991 closed 5 months ago
3
AssertionError: Internal structure score out of bounds in Annotation(id=3761,scan_id=516)

#62 YalienY opened 1 year ago
0
fix np.float and np.int to float and int

#61 jason660519 closed 5 months ago
2
Using populate.py

#60 pat119 closed 1 year ago
0
Mismatching SeriesInstanceUID and StudyInstanceUID

#59 pat119 closed 1 year ago
2
RuntimeError: Could not establish path to dicom files in MacOS

#58 shravaniurala closed 1 year ago
6
module 'cmap_d' error

#57 jsyoonDL opened 1 year ago
0
Fix SciPy DeprecationWarning.

#56 beaslera closed 11 months ago
1
Showing patients with multiple nodules

#55 jasonjin1 opened 2 years ago
9
OSError: Couldn't find DICOM files for Scan(id=12,patient_id=LIDC-IDRI-0001).

#54 Pollob001 closed 2 years ago
6
3D Annotation

#53 HarryChenn closed 2 years ago
9
Pylidc Annotation Class

#52 jasonjin1 closed 2 years ago
3
marching_cubes_lewiner

#51 leomensah closed 2 years ago
1
fix skimage.measure marching_cubes_lewiner import error

#50 yulinfeng000 closed 2 years ago
2
RuntimeError: Could not establish path to dicom files. Have you specified the `path` option in the configuration file C:\Users\user\pylidc.conf?

#49 Dhruv-Singhh closed 2 years ago
1
Not able to do path configuration for pylidc on mac

#48 Snigda0402 closed 2 years ago
1
Where to find pylidc.conf file in Google Colab?

#47 youssef12347 closed 3 years ago
1
how to obtain the physical bbox?

#46 L007 closed 3 years ago
5
ValueError: The length of the pixel data in the dataset (524285 bytes) doesn't match the expected length (524288 bytes).

#45 dinhanhx closed 3 years ago
5
How to access NBIA via pylidc

#44 dinhanhx closed 3 years ago
1
Fix hidden files in dicom folders

#43 hnguyentt closed 3 years ago
1
dicom, xml to niffty and niffty segmented

#42 mbartcus closed 3 years ago
1
Can I obtain annotated .dcm file with pylidc?

#41 GMBarra closed 4 years ago
4
Include path in error message when dicom path from config file doesn't exist

#40 notmatthancock opened 4 years ago
0
Can I obtain annotated non-nodules from using pylidc?

#39 shakjm closed 4 years ago
2
Path specification while working from GoogleColab

#38 aislam388 opened 4 years ago
0
bbox(): cut and save annotations

#37 anatielsantos closed 4 years ago
11
sqlite database path

#36 nanddalal opened 4 years ago
1
Contrast agent ambiguity

#35 Jonas1312 opened 4 years ago
4
Display more dicom metadata in visualization

#34 Jonas1312 closed 4 years ago
0
Problem when using Scan.visualize

#33 HenriqueBBrum closed 4 years ago
3
RescaleIntercept RescaleSlope rescaling of DICOM image

#32 lobantseff closed 4 years ago
4
Fix documentation

#31 Jonas1312 closed 4 years ago
1
Access all DICOM attributes

#30 Jonas1312 closed 4 years ago
2
Fix matplotlib API change

#29 Jonas1312 closed 4 years ago
0
Update database?

#28 Jonas1312 closed 4 years ago
2
bbox(): Tuple meaning?

#27 ganeshOnePlus closed 5 years ago
5
getting slow after loading a few dicoms

#26 SunAnLan closed 5 years ago
2
how to specify path in config file

#25 chinnujacob closed 5 years ago
27
Can the pylidc show non-nodules and nodules<3mm

#24 SunAnLan closed 5 years ago
4