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nsalomonis
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altanalyze
AltAnalyze is a multi-functional and easy-to-use software package for automated single-cell and bulk gene and splicing analyses. Easy-to-use precompiled graphical user-interface versions available from our website.
http://www.altanalyze.org
Apache License 2.0
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Error with sklearn on installing by pip
#54
wook2014
opened
1 year ago
6
The config folder cannot be found.
#53
wososa
opened
2 years ago
0
Error running RNASeq analysis with fastq files as input and assigned to groups
#52
jaydoc
opened
2 years ago
2
Error running alatanalyze after pip install -- FileNotFoundError: [Errno 2] No such file or directory: 'altanalyze'
#51
c2b2pss
opened
2 years ago
4
Predicted sample export failed in GUI
#50
aniruddh-shukla
opened
3 years ago
5
Errors and differences in results while running the CLI version for ICGS2
#49
therealgenna
opened
3 years ago
1
Error: No such file or directory: python2.7/site-packages/altanalyze/Config//arrays.txt
#48
therealgenna
opened
3 years ago
13
The viewer in not opening
#47
ChrisGai
opened
3 years ago
0
PageRank presents with an error
#46
nsalomonis
opened
4 years ago
1
How to enable cell type annotation like previous AltAnalyze Version.
#45
ewijaya
opened
4 years ago
4
TPM or RPKM?
#44
nsalomonis
closed
4 years ago
1
Containerization?
#43
YogiOnBioinformatics
opened
4 years ago
1
WikiPathways pathway visualization webservice not working
#42
nsalomonis
opened
4 years ago
0
Kallisto-splice empty BAM files
#41
nsalomonis
closed
4 years ago
1
Windows serialization load error - misopy
#40
nsalomonis
closed
4 years ago
1
Coordinate mismatch for extremely small exon regions
#39
nsalomonis
opened
4 years ago
0
A custom database
#38
OlgaVT
closed
4 years ago
2
Error in altanalyze calling getopt.py
#37
tmari
closed
4 years ago
1
Felis Catus Only AltAnalyze Issue
#36
proteasome
closed
4 years ago
3
Fix minor bugs in GO-Elite: Mm MPhenoOntology and Hs WikiPathways parsing
#35
warrenmcg
opened
7 years ago
0
Batch effect error
#34
GoogleCodeExporter
closed
4 years ago
2
Error message in processing CEL files
#33
GoogleCodeExporter
closed
4 years ago
0
Wish for checkboxes and option to save settings
#32
GoogleCodeExporter
closed
4 years ago
1
GO-Elite Reports a goelite_run variable error
#31
GoogleCodeExporter
closed
4 years ago
0
Which version of species-specific database (EnsMart) for mm9
#30
GoogleCodeExporter
closed
4 years ago
1
File "WikiPathways_webservice.pyc", line 64, in getPathwayAs NameError: global name 'client' is not defined
#29
GoogleCodeExporter
closed
4 years ago
0
Won't run in OS 10.9.1 to "Add new species"
#28
GoogleCodeExporter
closed
4 years ago
6
Downloading and installing a species-specific database via command-line requires version
#27
GoogleCodeExporter
closed
4 years ago
1
Group Files Annotations
#26
GoogleCodeExporter
closed
4 years ago
0
fewer options displayed
#25
GoogleCodeExporter
closed
9 years ago
2
unable to download database files
#24
GoogleCodeExporter
closed
4 years ago
1
setup.py py2exe includes bug
#23
GoogleCodeExporter
closed
4 years ago
1
AltAnalyze v.2.0.7 crash - local variable 'log_fold'
#22
GoogleCodeExporter
closed
9 years ago
1
Run compiled versions via CommandLine
#21
GoogleCodeExporter
closed
4 years ago
1
pair end rna seq issue
#20
GoogleCodeExporter
closed
9 years ago
3
Misc. 2.0.7 related issues
#19
GoogleCodeExporter
closed
9 years ago
1
Buggy 2.0.7
#18
GoogleCodeExporter
closed
4 years ago
1
Error encountered: Exon or junction is zero
#17
GoogleCodeExporter
closed
4 years ago
4
NKX2-5 missing from HuEx database
#16
GoogleCodeExporter
closed
4 years ago
1
UI function defaults stored in option_db
#15
GoogleCodeExporter
closed
4 years ago
1
Cannot open altanalyze on mac
#14
GoogleCodeExporter
opened
9 years ago
2
Missing exon array probesets from database
#13
GoogleCodeExporter
closed
4 years ago
1
Bugs with constitutive vs. known exons (e.g. core probesets)
#12
GoogleCodeExporter
closed
4 years ago
0
Cytoscape installation fails without warning
#11
GoogleCodeExporter
closed
4 years ago
2
Reduce database size
#10
GoogleCodeExporter
opened
9 years ago
0
2.01 alpha non-constitutive gene inclusion issue
#9
GoogleCodeExporter
closed
4 years ago
0
Any problems in RNA-seq anlysis
#8
GoogleCodeExporter
closed
4 years ago
7
Changes to ASPIRE p-value calculation
#7
GoogleCodeExporter
closed
9 years ago
0
Gene expression filtering not working in command-line mode
#6
GoogleCodeExporter
closed
4 years ago
0
Non-log expression error - AltAnalyze v.1.155 and below
#5
GoogleCodeExporter
closed
4 years ago
1
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