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nygenome
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Conpair
Concordance and contamination estimator for tumor–normal pairs
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Create output file for samples that have no overlapping markers
#23
MareikeJaniak
opened
1 year ago
0
Longer analysis time for WES
#22
CirclesYuan
opened
2 years ago
1
Conpair compatibility with GATK4 latest version
#21
Huma-Shehwana
opened
2 years ago
1
Conpair not compatible with GATK4.2.3
#20
Huma-Shehwana
opened
2 years ago
0
Regarding of interpretation and utilization
#19
hmkim
opened
2 years ago
0
IndexError: list index out of range
#18
stroke1989
opened
2 years ago
0
Compatible with rat genome?
#17
danielanach
opened
3 years ago
0
Conda package?
#16
brucemoran
opened
4 years ago
0
fix: high cov pushed all likelihoods to 0
#15
JenniferShelton
closed
4 years ago
0
docker image
#14
wgharib
opened
4 years ago
0
panel
#13
feihongloveworld
opened
5 years ago
0
Package the tool. Support gatk4 from conda. Add --genome option.
#12
vladsavelyev
opened
5 years ago
0
Support GATK 4
#11
vladsavelyev
opened
5 years ago
2
Tag a commit as a versioned release
#10
ckandoth
closed
4 years ago
1
Python 3 compatibility
#9
supernifty
closed
6 years ago
4
Markers for GRCH38
#8
Kinga277
opened
6 years ago
2
Is Conpair suitable for WES in single cell sequencing?
#7
epioneMW
opened
6 years ago
1
Input files reads and reference have incompatible contigs.
#6
stevekm
closed
6 years ago
2
Whethter Conpair is suitable for target panel sequencing for human ?
#5
zeronot
closed
6 years ago
7
Cannot unset --markers value for run_gatk_pileup_for_sample.py
#4
mmokrejs
closed
6 years ago
1
estimate_tumor_normal_contamination.py: ValueError: Not a bracketing interval.
#3
iranmdl
closed
7 years ago
1
how to find the Tumor of the swapped samples
#2
tangwei1129
closed
7 years ago
1
Bugfix. One could not specify CONPAIR_DIR on the command line.
#1
micknudsen
closed
7 years ago
1