ogotoh spaln issues - Githubissues

ogotoh / spaln

Genome mapping and spliced alignment of cDNA or amino acid sequences

GNU General Public License v2.0

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version 2.1.4 still available?

#25 vicenciooostra closed 4 years ago
4
Compilation error

#24 dpryan79 closed 4 years ago
2
Segmentation fault (core dumped)

#23 binlu1981 opened 5 years ago
13
About the output by using -O1

#22 ljl000 closed 5 years ago
10
What does the output mean by using spaln -O1 option

#21 ljl000 closed 5 years ago
4
Make 2.3.3d release

#20 nathanhaigh closed 5 years ago
6
Minimium exon length in 2.3.3

#19 jwasmuth opened 5 years ago
3
sortgrcd is only reporting one alignment

#18 jwasmuth opened 5 years ago
1
two errors of gff3 output

#17 Secretloong opened 5 years ago
1
Parameter optimization for non-model species (max gene size and so on)

#16 Secretloong opened 5 years ago
6
Segmentation fault in skl_rngH_ng

#15 pvanheus closed 5 years ago
2
Make "Specify database" error message more informative

#14 pvanheus closed 4 years ago
0
Question about the 6th column of spaln gff3 output

#13 b524198065 opened 5 years ago
3
An abnormal result for protein alignment

#12 xinwang-bio opened 5 years ago
2
makdbs example in documentation

#11 droe-nmdp closed 5 years ago
4
Segmentation fault when using -Q4 (but not -Q7)

#10 pvanheus closed 5 years ago
1
Confusing output when swapping input files

#9 pvanheus closed 5 years ago
1
ALN_TAB?

#8 cistarsa opened 6 years ago
7
What does the error "Vmf out of range" mean

#7 sanyalab closed 5 years ago
1
Segmentation fault (core dumped)

#6 cistarsa closed 5 years ago
1
Can't open query!

#5 geycu opened 6 years ago
3
make error

#4 AlexMorscher closed 5 years ago
2
possible to combine exons of same gene on different scaffolds?

#3 cistarsa opened 6 years ago
1
Increase MAXL from 256 to _POSIX2_LINE_MAX (2056)

#2 nathanweeks closed 4 months ago
2
spaln outputs 1-base negative cds gff3

#1 jesgomez opened 6 years ago
0