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omnideconv
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deconvBench
Comparison of 2nd generation deconvolution methods implemented in omnideconv
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How to get data
#36
grst
opened
6 months ago
5
Archive container as singularity image
#35
grst
closed
6 months ago
0
Add visualization scripts
#34
alex-d13
closed
7 months ago
0
Include all recent changes to main branch
#33
alex-d13
closed
8 months ago
0
continued on workflow documentation
#32
bernheder
closed
8 months ago
0
Remove CIBERSORTx credentials
#31
LorenzoMerotto
closed
6 months ago
0
description of some workflows
#30
bernheder
closed
9 months ago
0
Relative paths dev
#29
bernheder
closed
9 months ago
0
Add visualization scripts for main figures
#28
alex-d13
closed
6 months ago
0
Remove unused scripts and files
#27
alex-d13
closed
9 months ago
1
Documentation
#26
alex-d13
closed
6 months ago
1
No more absolute links in R scripts
#25
alex-d13
closed
9 months ago
5
How to select proper normalizations?
#24
LorenzoMerotto
closed
9 months ago
0
Lorenzo tests
#23
LorenzoMerotto
closed
9 months ago
6
integrating latest changes
#22
LorenzoMerotto
closed
1 year ago
0
Current issues with the project benchmarking and pipeline
#21
LorenzoMerotto
closed
9 months ago
3
Step-by-step benchmarking plan
#18
FFinotello
closed
9 months ago
6
Validation datasets
#20
FFinotello
closed
9 months ago
7
Slides meeting 24/04 - Signature matrix
#17
LorenzoMerotto
closed
9 months ago
1
preliminary results for kathis report
#16
kathireinisch
closed
9 months ago
0
Evaluation metric
#15
LorenzoMerotto
closed
9 months ago
2
Simulation scenarios and new data
#14
kathireinisch
closed
2 years ago
3
Publication strategy
#13
FFinotello
closed
9 months ago
5
mRNA bias in mouse data
#12
LorenzoMerotto
closed
9 months ago
2
Benchmarking fine-grained deconvolution
#11
FFinotello
closed
9 months ago
0
Re-define controlled vocabulary
#10
kathireinisch
closed
9 months ago
2
Generate simulation scenarios
#9
kathireinisch
closed
9 months ago
1
Preliminary results on real mouse data
#8
FFinotello
closed
9 months ago
2
First visualisation
#7
grst
closed
2 years ago
3
Prepare data for benchmarking
#6
kathireinisch
closed
3 years ago
0
Validate quantiseqr
#5
kathireinisch
closed
3 years ago
0
Implementation platform
#4
grst
closed
2 years ago
0
Generate gold standard data
#3
grst
closed
9 months ago
5
Test datasets
#2
grst
closed
9 months ago
2
Evaluation criteria
#1
grst
closed
9 months ago
19
Test datasets
#19
grst
closed
9 months ago
12