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ontoportal-lirmm
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annotators
Web service to add functionalities to the http://bioportal.bioontology.org and similar ontology annotators
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Annotator doesn't support slices
#50
Bilelkihal
opened
1 month ago
0
AnnotatorPlus call with percent signs throws com.eclipsesource.json.ParseException
#49
jvendetti
opened
2 months ago
0
Mappings are not working in the annotator
#48
Bilelkihal
opened
5 months ago
1
Text of "6-mers" with negation detection enabled throws exception
#47
jvendetti
opened
11 months ago
0
Reproduce NCBO Annotator Plus error on local proxy
#46
jonquet
opened
2 years ago
1
NCBO Annotator Plus call generates error
#45
jonquet
opened
2 years ago
3
Problem with NegEx negation
#44
jonquet
opened
2 years ago
0
There is a need to externize the config file from the code
#43
syphax-bouazzouni
opened
2 years ago
0
The annotations score is not display in the annotator
#42
syphax-bouazzouni
closed
2 years ago
1
Log4j exploit in the annotators
#41
syphax-bouazzouni
closed
2 years ago
0
Bump log4j-core from 2.17.0 to 2.17.1 in /sifr-bioportal-annotation-model
#40
dependabot[bot]
closed
2 years ago
0
Updating LIRMM annotator plus old dependencies
#39
syphax-bouazzouni
closed
2 years ago
0
Bump log4j-core from 2.16.0 to 2.17.0 in /sifr-bioportal-annotation-model
#38
dependabot[bot]
closed
2 years ago
0
Bump log4j-core from 2.7 to 2.16.0 in /sifr-bioportal-annotation-model
#37
dependabot[bot]
closed
2 years ago
0
Bump log4j-core from 2.7 to 2.15.0 in /sifr-bioportal-annotation-model
#36
dependabot[bot]
closed
2 years ago
1
Bump httpclient from 4.5.2 to 4.5.13 in /sifr-bioportal-annotator-proxy
#35
dependabot[bot]
closed
2 years ago
0
Les apostrophes font planter FastContext
#34
jonquet
opened
3 years ago
1
Bump junit from 4.12 to 4.13.1 in /sifr-bioportal-annotation-model
#33
dependabot[bot]
closed
2 years ago
0
Bump junit from 4.12 to 4.13.1 in /sifr-bioportal-annotator-proxy
#32
dependabot[bot]
closed
2 years ago
0
Bump junit from 4.12 to 4.13.1 in /sifr-bioportal-annotation-postannotations
#31
dependabot[bot]
closed
2 years ago
0
Bump junit from 4.12 to 4.13.1 in /sifr-bioportal-annotator-scoring
#30
dependabot[bot]
closed
2 years ago
0
Bump log4j-core from 2.7 to 2.13.2 in /sifr-bioportal-annotation-model
#29
dependabot[bot]
closed
2 years ago
1
Upgrade ConText component to FastContext in production
#28
jonquet
opened
5 years ago
3
Activating filtering by semantic group conflicts with filtering with semantic types
#27
jonquet
opened
5 years ago
0
Annotation proxy reports 401 error when using HTTP Authorization request headers
#26
jvendetti
closed
5 years ago
6
Implementation of scoring threshold within the proxy
#25
jonquet
closed
6 years ago
3
Disambiguation of concepts using semantic types
#24
jonquet
opened
7 years ago
0
Preprocess text with check spelling component
#23
jonquet
opened
7 years ago
0
Problème recensés avec Context/NegEx
#22
jonquet
opened
7 years ago
7
Les annotators n'acceptent pas les appels en POST
#21
jonquet
closed
7 years ago
8
Enable Authorization header for apikey token
#20
jonquet
closed
7 years ago
1
Identify the French NegEx/Context trigger terms
#19
jonquet
closed
7 years ago
3
Use NegEx/Context to post process the annotations
#18
jonquet
closed
7 years ago
12
Implement the preprocessing of the text with TreeTager
#17
jonquet
closed
7 years ago
2
Get the annotations in the BRAT format
#16
jonquet
closed
6 years ago
8
Implement the mapping_ontologies parameter to specify the ontologies to use when mapping semantic expansion is activated
#15
jonquet
opened
7 years ago
2
Implement the semantic group expansion
#14
jonquet
closed
7 years ago
12
Implement the semantic type expansion
#13
jonquet
opened
7 years ago
8
error with URL containing "\n"
#12
julien-diener
closed
9 years ago
1
find a test example for cvalue and cvalueH
#11
julien-diener
closed
9 years ago
1
implement cvalueH score
#10
julien-diener
closed
7 years ago
2
RDF format implemented in develop branch
#9
vemonet
closed
9 years ago
1
It is RDF format not RBF !
#8
vemonet
closed
9 years ago
1
API Key should not be hard coded in SIFR and IBC annotator
#7
vemonet
closed
9 years ago
3
implement cvalue score
#6
julien-diener
closed
7 years ago
7
implement score old on mappings
#5
julien-diener
closed
9 years ago
8
hierarchy element should be the same given by bioportal
#4
julien-diener
closed
9 years ago
1
Rename project to "annotators"
#3
julien-diener
closed
9 years ago
1
keep ordering of JSONObject entries
#2
julien-diener
closed
9 years ago
3
Remove hard coded apikey
#1
julien-diener
closed
9 years ago
1
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