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opencb
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cellbase
High-Performance NoSQL database and RESTful web services to access to most relevant biological data
Apache License 2.0
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TASK-5388 - Add AlphaMissense predictions
#698
jtarraga
opened
2 days ago
0
TASK-5387 - Add Polygenic Scores (PGS)
#697
jtarraga
opened
2 days ago
0
TASK-5564 - Update data sources for CellBase 6.2
#696
jtarraga
opened
2 days ago
0
TASK-5318 - Implement custom annotator to allow clients private files
#695
jtarraga
opened
2 days ago
0
TASK-6399 - CI/CD: Include save reports option for tasks workflows
#694
juanfeSanahuja
opened
1 week ago
0
TASK-6347 Fix normalization issue in ClinVar
#693
jtarraga
closed
1 week ago
0
TASK-6026 - Refactor the build.sh, test.sh, and run.sh scripts to remove commands and unify the scripts
#692
juanfeSanahuja
closed
2 weeks ago
0
TASK-4970 - New CI/CD should be triggered when a PR is approved for OpenCGA repository
#691
juanfeSanahuja
closed
2 weeks ago
0
fix truncation of results in phased queries where checkAminoAcidChange=TRUE
#690
julie-sullivan
opened
1 month ago
0
TASK-5789 - Add dbSNP to CellBase
#689
jtarraga
closed
2 months ago
1
Fix CellBase endpoint: meta/{species}/versions
#688
jtarraga
closed
2 months ago
0
TASK-5385 Add mitochondrial data from Gnomad v3.1.2
#687
jtarraga
closed
5 months ago
1
TASK-5571 Autocomplete with ontologies not working for CMH
#686
jtarraga
closed
4 months ago
1
TASK-5444 - Fix OpenCB repository versions to conform to XetaBase 2.0.0 version
#685
juanfeSanahuja
closed
5 months ago
1
TASK-5392
#684
imedina
closed
4 months ago
1
TASK-5457 Fix CellBase annotation queries for SV variants
#683
jtarraga
closed
5 months ago
1
TASK-5447 Fix CellBase variant annotation queries failing if data source does not exist
#682
jtarraga
closed
5 months ago
1
TASK-4437 - Update general dependencies from dependabot (security alerts)
#681
juanfeSanahuja
closed
5 months ago
1
TASK-5425 - PortPatch 1.10.1 -> 2.0.0
#680
juanfeSanahuja
closed
6 months ago
1
TASK-5340 Fix CellBase web services initialization
#679
jtarraga
closed
7 months ago
1
TASK-5212 Fix 'cellbase-admin.sh build' for clinical variants
#678
jtarraga
closed
7 months ago
1
TASK-5212 Fix 'cellbase-admin.sh build' for clinical variants
#677
jtarraga
closed
6 months ago
1
TASK-4988 Fix CellBase CLI to create API keys that only include a quota
#676
jtarraga
closed
8 months ago
1
TASK-5061 - Replace the mongoDB step in the Cellbase build with a kubectl that tunnels to a machine where the test data already exists
#675
juanfeSanahuja
closed
8 months ago
1
TASK-5120 - Port Patch 1.6.5 -> 1.10.0
#674
juanfeSanahuja
closed
8 months ago
2
TASK-5120 - Port Patch 1.6.5 -> 1.10.0
#673
juanfeSanahuja
closed
8 months ago
1
Fix insertion with n consequence type
#672
awab-ahmed
opened
9 months ago
0
TASK-2095 - Duplicated libraries at opencga/build/libs
#671
juanfeSanahuja
closed
7 months ago
1
Server down
#670
oeway
opened
9 months ago
0
TASK-4976 Fix error handling when an exception raises in the CellBase Rest server constructors
#669
jtarraga
closed
9 months ago
1
TASK-4976 Fix error handling when an exception raises in the CellBase Rest server constructors
#668
jtarraga
closed
9 months ago
1
TASK-5025 CellBase CI/CD fails due to a JUnit test error
#667
jtarraga
closed
9 months ago
1
fix spanning deletion annotation
#666
awab-ahmed
closed
9 months ago
0
Fix decomposed mnv codon change
#665
awab-ahmed
closed
9 months ago
0
TASK-4967 - ArrayOutOfBounds using cellbase client
#664
j-coll
closed
9 months ago
1
fix long mnv for 1bp ref or alt
#663
awab-ahmed
closed
10 months ago
0
TASK-4761
#662
jtarraga
closed
10 months ago
1
Fix long mnv bug
#661
awab-ahmed
closed
10 months ago
0
TASK-4641- Implement an API key to control the number of queries
#660
jtarraga
closed
9 months ago
1
TASK-4225
#659
jtarraga
closed
11 months ago
1
TASK-4464
#658
juanfeSanahuja
closed
1 year ago
1
build(deps): bump jetty-server from 9.4.17.v20190418 to 9.4.51.v20230217
#657
dependabot[bot]
opened
1 year ago
0
TASK-4289 - Upgrade JVM to 8u372 in opencga Docker
#656
juanrizetta
closed
1 year ago
1
TASK-4530 Fix CellBase normalization configuration
#655
jtarraga
closed
1 year ago
1
TASK-4157 Implement support for setting a default data release for each CellBase version
#654
jtarraga
closed
1 year ago
1
TASK-1111 Add Pharmagenomics data to CellBase
#653
jtarraga
closed
11 months ago
1
TASK-4171 Fix MongoDB driver in cellbase 5.1
#652
jtarraga
closed
1 year ago
2
build(deps): bump jetty-server from 9.4.17.v20190418 to 10.0.14
#651
dependabot[bot]
closed
1 year ago
1
TASK-4163
#650
juanfeSanahuja
closed
1 year ago
1
TASK-4032 - CI/CD new Workflow to publish CELLBASE docker on TASK branch
#649
juanfeSanahuja
closed
1 year ago
1
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