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openpaul / fqless

less like viewer for fastq files
GNU General Public License v2.0
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allow pipes #10

Open tolot27 opened 6 years ago

tolot27 commented 6 years ago

As long as text search is not supported, STDIN or other named pipes (eg fqless <(fgrep 1234 test.fq)) would be really helpful just to inspect a single sequence or small subset very quickly.

openpaul commented 6 years ago

It turns out that using pipes results in difficulties changing colors on the TTY. I did not find a solution that allowed for custom colors and pipe input. But I will be looking into it, maybe I'll find a solution.