opentargets / issues

Issue tracker for Open Targets Platform and Open Targets Genetics Portal
https://platform.opentargets.org https://genetics.opentargets.org
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Genetics portal evidence - include beta and corresponding standard error #1414

Closed DSuveges closed 3 years ago

DSuveges commented 3 years ago

GWAS evidence sourced from the OT genetics portal contains association parameters:

Associations run on continuous traits however don't have odds ratio, instead the effect size is measured in beta. The relevant data table in OT genetics contains this information, however not yet extracted. This should also be added the evidence string and the relevant fields in the json schema should also be added.

Required Actions:

d0choa commented 3 years ago

tasks will continue in #1413