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Issue tracker for Open Targets Platform and Open Targets Genetics Portal
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21.11 release planning #1653

Closed ktsirigos closed 2 years ago

ktsirigos commented 3 years ago

Release planned for Thursday, November 25, 2021

Preparatory tasks Task Responsible person / team Deadline Done? Comment
Confirm data submission window is acceptable Kostas --
  • - [x]
--
Confirm EFO version Kostas --
  • - [x]
v. 3.35
Confirm Ensembl version Kostas --
  • - [x]
v. 104
Confirm data receipt from providers Kostas 25.10
  • - [ ]
--
Data-team Task Responsible person / team Deadline Done? Comment
Update JSON schema Irene 08.10
  • - [x]
--
Freeze JSON schema - notify about latest Irene 09.10
  • - [x]
--
Generate and upload TEPs Irene 29.10
  • - [X]
gs://otar001-core/TEPs/data_files/tep-2021-10-26.json.gz
Generate and upload Chemical Probes Irene xx.xx
  • - [ ]
--
Generate and upload Mouse Phenotypes Kirill xx.xx
  • - [ ]
--
Review data submissions Kirill xx.xx
  • - [ ]
--
Generate internal evidence Kirill xx.xx
  • - [ ]
--
Finalise data submissions / notify Cinzia Kirill & Irene xx.xx
  • - [ ]
--
Generate EPMC evidence Daniel xx.xx
  • - [ ]
--
Make a release of the parsers repo Irene 10.11
  • - [ ]
--
Write Cancer Biomarkers documentation Irene xx.xx
  • - [ ]
--
Generate post-pipeline release metrics Kirill xx.xx
  • - [ ]
--
Conduct data QC team ongoing until xx.xx
  • - [ ]
--
Implement Gene2Phenotype evidence updates Irene
  • - [ ]
Data not yet updated. @ktsirigos has contacted them
Implement Project Score evidence updates Daniel
  • - [X]
gs://otar000-evidence_input/CRISPR/json/crispr-2021-10-26.json.gz
Recurate target safety annotation for Urban et al Irene
  • - [ ]
--
Review tickets opened after investigating 21.09 failed evidence Kirill
  • - [ ]
--
Review evidence schema required fields Irene 29.10
  • - [x]
#1823
Backend-team Task Responsible person / team Deadline Done? Comment
Update ETL team 29.10
  • - [ ]
Freeze ETL - notify about latest version for tech notes Cinzia 01.11
  • - [ ]
Confirm all data is available Cinzia 08.11
  • - [ ]
Run platform-input-support & ETL pipeline Cinzia 08.11
  • - [ ]
Ingest into ElasticSearch and expose API Cinzia 15.11
  • - [ ]
Run API integration tests Jarrod 15.11
  • - [ ]
Create a candidate release test instance (opentargets.xyz domain) Manuel 22.11
  • - [ ]
Run platform-output-support to generate data dumps (FTP etc) Cinzia 23.11
  • - [ ]
Deploy infrastructure via Terraform - notification Manuel 24.11
  • - [ ]
Frontend-team Task Responsible person / team Deadline Done? Comment
Update UI team until 17.11
  • - [ ]
Ensure main branch preview is available Alfredo 19.11
  • - [ ]
Freeze and bundle UI to handover for deployment Alfredo 22.11
  • - [ ]
Conduct UI QC checks team ongoing until 22.11
  • - [ ]
Post-release tasks Task Deadline to complete task Responsible person / team Done? Comment
Close release on GitHub Kostas 29.11
  • - [ ]
Notify EBI search to fetch data (eb-eye@ebi.ac.uk / oedbali@ebi.ac.uk) Kostas 29.11
  • - [ ]
Send email to technical newsletter group Kostas 29.11
  • - [ ]
Documentation updates Kostas & Andrew 29.11
  • - [ ]
Review outstanding release-related GitHub tickets Kostas 29.11
  • - [ ]
Submit sitemaps Kostas & Andrew 29.11
  • - [ ]
ktsirigos commented 2 years ago

new ticket has been created to avoid confusion