L2G FE changes for Study-locus page

[edm1]

• [ ] Discuss table design with @andrewhercules @edm1
• [ ] Put L2G Table at the top. All genes at locus with their associated scores (no threshold). Hover over to get raw logi and logo scores (5 individual + overall).
• [ ] Move gene bar upward on colocalisation page (cosmetic: FE only)

[edm1]

Need to make sketch of this table and discuss API query

[edm1]

Changes discussed 30/1/20:

• [ ] Change header "New stuff goes here..." to “Gene prioritisation using locus-to-gene pipeline"
• [ ] Subtitle change "With some more details on Maternal history of Alzheimer's disease (Marioni RE, 2018) here?" to "Which genes were prioritised by L2G pipeline at this locus?"
• [ ] Change header "QTL Colocalisation" to “Gene prioritisation using colocalisation analysis"
• [ ] Tooltip for “Overall L2G score” column header "Overall evidence linking {gene} to this study using all features. Score range [0, 1]."
• [ ] Tooltip for “Variant pathogenicity” column header "Evidence linking {gene} to this study including variant pathogenicity features only. Score range [0, 1]."
• [ ] Tooltip for “Distance” column header "Evidence linking {gene} to this study including distance features only. Score range [0, 1]."
• [ ] Tooltip for “QTL coloc” column header "Evidence linking {gene} to this study including molecular trait colocalisation features only. Score range [0, 1]."
• [ ] Tooltip for “Chromatin interaction” column header "Evidence linking {gene} to this study including chromatin interaction features only. Score range [0, 1]."
• Default sort by descending "Overall L2G score"

[LucaFumis]

If last comment opentargets/issues#2334 is correct, then these apply here:

• [ ] Column header "Distance to locus" to "Distance to locus (bp)"
• [ ] Column "Distance to locus" to use comma for a thousands separator, e.g. 1341234 to 1,341,234

[LucaFumis]

Development work done and code all reviewed. Will merge once the API work is ready to be deployed.

[andrewhercules]

Ticket closed as work completed