Currently finemapping of a loci can fail for a variety of reasons, but the current implementation will often only raise an error when it reaches, and fails, the stage of extracting the numpy array from the block matrix. This means it isn't immediately clear whether the cause of the issue is the sumstats or the LD index.
Background
Currently finemapping of a loci can fail for a variety of reasons, but the current implementation will often only raise an error when it reaches, and fails, the stage of extracting the numpy array from the block matrix. This means it isn't immediately clear whether the cause of the issue is the sumstats or the LD index.
Tasks