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Variant-based evidence API (e.g. clinvar, uniprot) #3403

Open DSuveges opened 3 months ago

DSuveges commented 3 months ago

The current variant page design contains two widgets with disease/target evidence based on Uniprot and ClinVar evidence. The data should be pulled out from the current evidence table, however the current API does not allow for this action. We need to allow the retrieval of evidence by datasourceId and variantId.

remo87 commented 2 months ago

@DSuveges do we need one or multiple variant ids?

d0choa commented 2 months ago

discussed on Aug 7th meeting...

Variant API endpoint will have Uniprot and ClinVar information by using an abstraction that pulls evidence data with a given variantId and datasourceId.

Some background on how the widgets were implemented using mock data is available in https://github.com/opentargets/issues/issues/3318

@remo87 will work on this while @gjmcn is away.

d0choa commented 2 months ago

@remo87 updated in the 14/08 meeting, that he's finishing the last details and API should be ready for testing inminently

prashantuniyal02 commented 2 months ago

@remo87 deployed this on 14/08

buniello commented 2 months ago

this is ready for FE work as discussed @gjmcn