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oxpig / ANARCI

Antibody Numbering and Antigen Receptor ClassIfication
BSD 3-Clause "New" or "Revised" License
161 stars 84 forks source link

Installation error #42

Open fredsamhaak opened 1 year ago

fredsamhaak commented 1 year ago

I cloned the repository of ANARCI and tried to install it using python setup.py install --user (I did this after the installation of HMM and biopython). but I got this error: image

Would you please help with this? Thank you very much and really looking forward to hearing from you.

merkys commented 1 year ago

@fredsamhaak Do you have MUSCLE installed on your system? The failure seems due to missing muscle executable.

awesome-crab commented 1 year ago

Hello, it seems like this is a duplicate of https://github.com/oxpig/ANARCI/issues/16

fredsamhaak commented 1 year ago

Hello @merkys, sorry for the late response. muscle is installed on my system. I've tried another package called abnumber which is based on anarci. After conda install AbNumber (successfully), I tried to run the example, but got an error: image

I don't know if this is related to the previous error. Would you please help me with this? Thank you very much!