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oxpig / ANARCI

Antibody Numbering and Antigen Receptor ClassIfication
BSD 3-Clause "New" or "Revised" License
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Update schemes.py #70

Open dudzicp opened 8 months ago

dudzicp commented 8 months ago

Updated smooth insertions logic as in case of cterm smoothing insertions were converted to matches causing downstream problems (e.g. in kabat alignment)

dudzicp commented 8 months ago

@broncio123 can you look into this?

dudzicp commented 8 months ago

As an example, investigate the following sequence: QSVLTQPPSVSEAPRQRVTITCSGSSSNIGNNAVNWYQQLPGKAPKLLINAADRCPRILMRCKQDSDCLAGCVCGPNGFCGTNSGVPDRFSGSSSGNTASLTITGAQAEDEADYYCNSRDSSGNNWVFGGGTKVTVL numbered in kabat scheme.