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oxpig / ANARCI

Antibody Numbering and Antigen Receptor ClassIfication
BSD 3-Clause "New" or "Revised" License
161 stars 84 forks source link

how to install with conda or pip on apple silicon? #75

Closed 0x1orz closed 6 months ago

0x1orz commented 6 months ago

Since bioconda doesn't support Apple Silicon (ARM64) yet, I had installed hmmer-3.4 with brew install hmmer, but failed to install anarci informed :

Could not solve for environment specs
The following package could not be installed
└─ anarci is not installable because it requires
   └─ hmmer >=3.1 , which does not exist (perhaps a missing channel).
# hmmscan :: search sequence(s) against a profile database
# HMMER 3.4 (Aug 2023); http://hmmer.org/
# Copyright (C) 2023 Howard Hughes Medical Institute.
# Freely distributed under the BSD open source license.
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Usage: hmmscan [-options] <hmmdb> <seqfile>

Basic options:
  -h : show brief help on version and usage

Options controlling output:
  -o <f>           : direct output to file <f>, not stdout
  --tblout <f>     : save parseable table of per-sequence hits to file <f>
  --domtblout <f>  : save parseable table of per-domain hits to file <f>
  --pfamtblout <f> : save table of hits and domains to file, in Pfam format <f>
  --acc            : prefer accessions over names in output
  --noali          : don't output alignments, so output is smaller
  --notextw        : unlimit ASCII text output line width
....