phenopackets phenopacket-tools issues

phenopackets / phenopacket-tools

An app and library for building, conversion, and validation of GA4GH Phenopackets.

http://phenopackets.org/phenopacket-tools/stable/

GNU General Public License v3.0

13 stars 5 forks source link

issues

Newest

Newest Most commented Recently updated Oldest Least commented Least recently updated

Rename packages to `phenopacket-tools`

#48 julesjacobsen closed 2 years ago
3
Develop

#47 pnrobinson closed 2 years ago
0
static constructor naming conventions

#46 julesjacobsen closed 2 years ago
6
Add constants/values into a common package

#45 julesjacobsen closed 2 years ago
2
Invalid type url found

#44 pnrobinson closed 2 years ago
6
Add cli tool for nice HTML formated output of phenopacket

#43 pnrobinson closed 2 years ago
1
Retinoblastoma

#42 pnrobinson closed 2 years ago
7
minor addition

#41 pnrobinson closed 2 years ago
1
Document mapping of snake_case to lowerCamelCase when validating json

#40 cmungall closed 2 years ago
1
Enums are not validation

#39 cmungall closed 2 years ago
2
adding github actions

#38 cmungall closed 2 years ago
0
Fix path

#37 cmungall closed 2 years ago
1
Ontology validation of JSON

#36 julesjacobsen closed 2 years ago
1
individualBuilder

#35 pnrobinson closed 2 years ago
1
MetaDataBuilder

#34 pnrobinson closed 2 years ago
1
phenopacket builder should have function to update phenopacket

#33 pnrobinson closed 2 years ago
1
MetaDataBuilder should enable adding of list of updates

#32 pnrobinson closed 2 years ago
1
merge develop into main

#31 julesjacobsen closed 2 years ago
0
Develop

#30 julesjacobsen closed 2 years ago
0
Add InterpretationConverter interface and implement for CLI

#29 julesjacobsen closed 1 year ago
2
Rename phenopacket-general-schema.json to phenopacket-schema-2-0.json

#28 julesjacobsen closed 3 years ago
0
JSON Schema disease missing array type

#27 julesjacobsen closed 3 years ago
1
Develop

#26 julesjacobsen closed 3 years ago
0
Minor edits

#25 ielis closed 3 years ago
1
Develop

#24 julesjacobsen closed 3 years ago
0
Update poms to use common dependency management in parent

#23 julesjacobsen closed 3 years ago
0
Move phenopacket-validator into this repo

#22 julesjacobsen closed 3 years ago
3
Reduce jar size

#21 julesjacobsen closed 3 years ago
1
Update cli convert to use paths for inout and output

#20 julesjacobsen closed 3 years ago
0
Update cli convert to communicate incorrect input format to user

#19 julesjacobsen closed 3 years ago
0
Make cli work.

#18 julesjacobsen closed 3 years ago
0
Develop

#17 julesjacobsen closed 3 years ago
0
Enable JSON <-> YAML, JSON <-> binary conversion?

#16 julesjacobsen opened 3 years ago
8
fixes https://github.com/phenopackets/phenopacket-tools/issues/14

#15 pnrobinson closed 3 years ago
0
Conversion adds superfluous fields if v1 was empty

#14 pnrobinson closed 3 years ago
1
Revert "Develop"

#13 julesjacobsen closed 3 years ago
0
Develop

#12 julesjacobsen closed 3 years ago
0
mvn package does not work for me

#11 domibln closed 3 years ago
2
Add some converter classes for v1 to v2

#10 julesjacobsen closed 3 years ago
0
Develop

#9 pnrobinson closed 3 years ago
0
Add new Onset and Severity classes

#8 julesjacobsen closed 3 years ago
0
Develop

#7 pnrobinson closed 3 years ago
0
Develop

#6 pnrobinson closed 3 years ago
0
back merge

#5 pnrobinson closed 3 years ago
0
examples

#4 pnrobinson closed 3 years ago
0
update

#3 pnrobinson closed 3 years ago
0
Develop

#2 pnrobinson closed 3 years ago
0
v1 -> v2 conversion

#1 pnrobinson closed 3 years ago
2