MalariaSmearSearch

MalariaSmearSearch is a database of blood smears used in malaria diagnosis.

Setup

1. Get files

   git clone https://github.com/pierrepo/MalariaSmearSearch.git
   cd MalariaSmearSearch

2. Install virtualenv

   sudo pip3 install virtualenv

3. Create virtual environment

   virtualenv -p /usr/bin/python3 venv

4. Activate virtualenv

   source venv/bin/activate

5. Install requirements

   pip install -r requirements.txt

6. Initialize database

   python setup-db.py

7. Quit virtualenv

   deactivate

Usage

1. Update project repository

   git pull

2. Activate virtualenv

   source venv/bin/activate

3. Update requirements

   pip install -r requirements.txt

4. Run Python webserver

   python __init__.py

5. Open web browser at http://127.0.0.1:5000/

6. Kill web app

   ctrl-c

7. Quit virtualenv

   deactivate