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pinder-org
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pinder
PINDER: The Protein INteraction Dataset and Evaluation Resource
https://pinder-org.github.io/pinder/
Apache License 2.0
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Inclusion of D-peptides in dataset
#26
alex-hh
opened
3 days ago
2
Robustifying download_entry
#25
alex-hh
opened
4 days ago
2
pdb_kind in sequence dataset
#24
Leo-T-Zang
closed
1 week ago
1
Problems with dataloading (speed and `no common residues found!` error)
#23
eswan01
closed
3 weeks ago
3
fix: element_types were left out of default collate after PR #21
#22
danielkovtun
closed
1 month ago
1
Fix confusing default torch transform
#21
danielkovtun
closed
1 month ago
1
Confusing features in dataset returned by `get_torch_loader`
#20
eswan01
closed
1 month ago
1
fix: holo monomer fallback in loader
#19
danielkovtun
closed
1 month ago
1
Fix unbound RMSD calculation in low homology structures
#18
danielkovtun
closed
1 month ago
1
feat: RandomLigandTransform to perform system level ligand transformation (to be used in training)
#17
akdel
closed
1 month ago
1
feat: chain_ids in PinderDataset
#16
akdel
closed
1 month ago
1
docs: update mlsb challenge documentation
#15
danielkovtun
closed
1 month ago
1
Select new random index on dimer filter failure
#14
ntoxeg
closed
1 month ago
1
`BadStructureError` exception on writing a PDB file
#13
ntoxeg
closed
1 month ago
0
Pytorch dataloader example
#12
danielkovtun
closed
1 month ago
1
fix: add default option to fallback to holo monomers in PPIDataset
#11
danielkovtun
closed
2 months ago
1
APO and predicted structures will not load with PairedPDB from PinderSystems passed to function
#10
allcatsaregrey
closed
2 months ago
1
Expose biotite PDB back-end through PinderSystem
#9
ejmeitz
closed
2 months ago
7
Unique Apo Structures
#8
ejmeitz
closed
2 months ago
7
Predicting Interactions
#7
cerabinowitz
closed
2 months ago
1
CI & documentation improvements
#6
danielkovtun
closed
3 months ago
1
Update README.md
#5
akdel
closed
3 months ago
1
Publish pypi
#4
danielkovtun
closed
3 months ago
1
Publish pypi
#3
danielkovtun
closed
3 months ago
1
Publish pypi
#2
danielkovtun
closed
3 months ago
0
Initial release
#1
danielkovtun
closed
3 months ago
1