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pinellolab
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simba
SIMBA: SIngle-cell eMBedding Along with features
https://simba-bio.readthedocs.io
BSD 3-Clause "New" or "Revised" License
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Simba variant
#28
jykr
closed
2 days ago
0
PyTorch was compiled without NumPy support
#27
lan-zw
opened
1 month ago
0
RuntimeError: An attempt has been made to start a new process before the current process has finished its bootstrapping phase.
#26
nachinGirid
opened
6 months ago
0
i cant find attribute 'load_config_simba'
#25
ffggsh
opened
7 months ago
1
Error in executing si.tl.find_master_regulators: KeyError: 'SREBF1'
#24
Tianran1998
closed
9 months ago
0
TypedStorage warning, any plan to ameliorate?
#23
vjcitn
opened
11 months ago
0
No module named 'torchbiggraph.converters.importers'
#22
yoeHuuui
closed
11 months ago
1
preliminary R bindings for simba
#21
vjcitn
closed
1 year ago
2
plans to merge dev (significance tests) to main release?
#20
vjcitn
closed
1 year ago
0
Update _pbg.py
#19
JunxiFeng
closed
1 year ago
0
significance calculation
#18
sinkahak
closed
1 year ago
4
UnsatisfiableError
#17
JunxiFeng
closed
1 year ago
2
Problem generating the graph
#16
sinkahak
closed
1 year ago
5
Merge CI updates for TF counting functionality
#15
jykr
closed
1 year ago
0
Update Installation.rst for dev
#14
jykr
closed
1 year ago
0
Update README.md to include codes used in manuscript
#13
jykr
closed
1 year ago
0
update pandas functions to reduce warnings
#12
mvinyard
opened
1 year ago
0
Pull master to marker_test
#11
jykr
closed
1 year ago
0
glibc errors at install
#10
wes-lewis
opened
2 years ago
1
update installation
#9
huidongchen
closed
2 years ago
0
AttributeError: 'ConfigFileLoader' object has no attribute 'load_config_simba'
#8
mvinyard
closed
2 years ago
1
Query genes method not yielding expected behavior
#7
daquang
closed
2 years ago
2
update tutorial github links
#6
huidongchen
closed
2 years ago
1
PBG training error and unable to perform conda install
#5
daquang
closed
2 years ago
6
Add readme for R script
#4
huidongchen
closed
2 years ago
1
Expand testing
#3
huidongchen
closed
2 years ago
1
Scale discretization
#2
huidongchen
closed
2 years ago
1
Add new function read_10x_h5()
#1
huidongchen
closed
2 years ago
0