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plant720 / Easy353

Easy353 is a tool for recovering Angiosperms353 gene set.
MIT License
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if reference sequence is amino acid #6

Closed huang-baisha closed 4 months ago

huang-baisha commented 5 months ago

hello, I used fdog (https://github.com/BIONF/fDOG) to construct a reference sequence (amino acid sequence) based on which I would like to use easy353 to identify homologous genes in other species sequencing data. Does easy353 not recognize the reference sequence of the amino acid sequence? What should I do?

plant720 commented 4 months ago

Thank you for reaching out. Unfortunately, Easy353 does not currently support using an amino acid sequence as a reference sequence. At the moment, there isn't a straightforward solution for this issue. You might need to explore alternative tools or approaches.