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pombase
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allele_qc
Quality control for PomBase alleles
MIT License
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Fix modifications
#66
manulera
closed
1 year ago
10
GH action fails
#65
manulera
closed
1 year ago
0
Wrongly labelled gene?
#64
manulera
closed
1 year ago
2
Address "ghost positions" for the long term
#63
manulera
opened
1 year ago
1
Old modified residue no longer in gene structure
#62
manulera
closed
1 year ago
9
Issue 60
#61
manulera
closed
1 year ago
0
Error in format_auto_fix
#60
manulera
closed
1 year ago
1
Ask authors to merge CTD alleles
#59
manulera
opened
1 year ago
1
Include RNA alleles in the fixes?
#58
manulera
closed
1 year ago
1
Add telomeres
#57
manulera
closed
1 year ago
0
Retroactively fix manual changes without change_name_to
#56
manulera
closed
1 year ago
4
crispr alleles
#55
ValWood
closed
1 year ago
1
tor2-13
#54
ValWood
closed
1 year ago
6
Start using canto alleles file
#53
manulera
closed
1 year ago
0
CTD discrepancies
#52
ValWood
closed
1 year ago
0
Same description, different names
#51
manulera
closed
1 year ago
2
Changes in description for alleles that have description in the allele name
#50
manulera
closed
1 year ago
3
Unexpected allele changes
#49
manulera
closed
1 year ago
1
Manual fixes for cam1 alleles and existing manual fixes
#48
manulera
closed
1 year ago
0
General improvements
#47
manulera
closed
1 year ago
1
Convert endpoints from post to get + tests + multi-transcript support
#46
manulera
closed
1 year ago
0
"Systematic id does not exist" for SPNCRNA.1715
#45
kimrutherford
closed
1 year ago
3
Add format parameter to /genome_region
#44
kimrutherford
closed
1 year ago
7
Keeping track of applied changes
#43
manulera
closed
1 year ago
1
Github action / commit data / copy to container
#42
manulera
closed
1 year ago
2
Better example for multi shift fix
#41
manulera
closed
1 year ago
1
Issue 37 and 38
#40
manulera
closed
1 year ago
0
Issue #37
#39
manulera
closed
1 year ago
0
Make the api work for multi-aa mutation
#38
manulera
closed
1 year ago
0
Include aminoacid in insertions
#37
manulera
closed
1 year ago
2
Api stuff
#36
manulera
closed
1 year ago
0
Arrange svn access
#35
manulera
closed
1 year ago
0
Silent errors
#34
manulera
opened
1 year ago
1
Chado load issue
#33
manulera
closed
1 year ago
0
Refactor2simplify
#32
manulera
closed
1 year ago
0
Replace wrong modification data in svn repo
#31
manulera
closed
1 year ago
2
Better handling of manual_changes for cannot fix
#30
manulera
closed
1 year ago
1
Handle manual corrections
#29
manulera
closed
1 year ago
1
list all histone genes
#28
manulera
closed
1 year ago
1
fix conditions of multi-shift to check for position only
#27
manulera
closed
1 year ago
1
Handle fixing of sequence errors in variants where residue is optional
#26
manulera
closed
1 year ago
2
Adapt to the new file structure in genome_changelog
#25
manulera
closed
1 year ago
1
Deal with multi-transcript loci
#24
manulera
closed
1 year ago
0
improved docs
#23
manulera
closed
1 year ago
0
Fix mitochondria translation
#22
manulera
closed
1 year ago
24
Protein modifications
#21
manulera
closed
1 year ago
0
Remove verbose errors when position falls out of the protein
#20
manulera
closed
1 year ago
0
Downstream effects of fixing modifications
#19
manulera
closed
1 year ago
1
Add user-friendly errors to API response
#18
manulera
closed
1 year ago
0
Discuss new type amino_acid_other?
#17
manulera
closed
1 year ago
1
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