How to compile

make

can clean up all intermediates with

make clean

Title: Adding species to the stdpopsim library

Journal:

1. eLife ("research advances")
2. Molecular Ecology Resources
3. MBE

Goal:

• preprint by ProbGen, March 28
• Hahaha no that didn't happen. Revised: Good document for discussion next meeting (May 3)

19 April: Full draft. TODOs include: add certain citations; acknowledgements; author list; figure out which species in the codebase are fully QC'd and which almost -> make phylogeny figure; a few other assorted things (see TODO in text) and resolving specific comments.

If you want to do the main writing for a particular section, claim it in the outline .md file (NAME). If you want to do some writing but are ambivalent to section, let Elise know.

09 March: Merged outline and PRs, added some section assignments 08 March: Outline restructured based on morning meeting 07 March: Outline restructured based on https://github.com/popsim-consortium/adding-species-manuscript/issues/1 and https://github.com/popsim-consortium/adding-species-manuscript/pull/2

• major pieces kept, focus of first paragraph changed, shifted a few paragraphs around in order