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populationgenomics
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analysis-runner
MIT License
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Analysis-runner should use latest set of pre-commit hooks
#664
illusional
opened
10 months ago
0
Dataproc: Force reinstall of cpg-utils
#663
illusional
closed
10 months ago
0
Link to driver job, instead of just batch
#662
illusional
closed
10 months ago
1
Analysis runner should convert an floating image tag to a docker digest
#661
illusional
opened
10 months ago
0
Extend minimum watch interval
#660
MattWellie
closed
11 months ago
1
Fix metadata URL construction + typing
#659
illusional
closed
10 months ago
0
Reduce cromwell polling
#658
MattWellie
closed
11 months ago
0
Use driver image as default in https transfer jobs
#657
EddieLF
closed
11 months ago
0
Use workload identity federation
#656
illusional
closed
10 months ago
0
Fix init script path for dataproc
#655
illusional
closed
12 months ago
0
Transition examples to use cpg_utils.get_batch
#654
illusional
closed
1 year ago
0
Fix tag ordering during deploy
#653
illusional
closed
1 year ago
0
Mount secret value directly
#652
illusional
closed
1 year ago
0
Ensure ar-guid starts alpha
#651
illusional
closed
1 year ago
0
Create copy_gencode_to_main.sh
#650
hopedisastro
closed
1 year ago
1
Complete prefix for allowed images in main
#649
MattWellie
closed
1 year ago
0
Add ar_guid support to analysis-runner + package
#648
illusional
closed
1 year ago
0
Update analysis-server requirements
#647
illusional
closed
1 year ago
0
Corrected driver image detection
#646
MattWellie
closed
1 year ago
0
Analysis runner bug - assuming config on import
#645
illusional
opened
1 year ago
0
Update hail in dataproc and support multiple versions
#644
daniaki
closed
12 months ago
0
Pass workflow ID file as a string
#643
MattWellie
closed
1 year ago
0
Use the existing command wrapper
#642
MattWellie
closed
1 year ago
0
Import constant within packaged Watcher job
#641
MattWellie
closed
1 year ago
0
Fixed syntax in job command executing python script
#640
EddieLF
closed
1 year ago
0
Change to mounted storage directory in unzip wrapper script
#639
EddieLF
closed
1 year ago
0
Export logs to analysis
#638
MattWellie
closed
1 year ago
0
Copy out Final Cromwell workflow Logs to a readable directory
#637
MattWellie
opened
1 year ago
0
Bump version: 2.40.8 → 2.40.9
#636
MattWellie
closed
1 year ago
0
Create copy_cram_for_str.sh
#635
hopedisastro
opened
1 year ago
0
Add metamist to driver image
#634
illusional
closed
1 year ago
0
Add script for copying reference truth
#633
MattWellie
closed
1 year ago
1
correction to cromwell metadata API call
#632
MattWellie
closed
1 year ago
1
Collected minor fixes
#631
jmarshall
closed
1 year ago
0
Generic files to release
#630
EddieLF
closed
1 year ago
0
added billing project argument to cram releaser script
#629
EddieLF
closed
1 year ago
0
Dataproc wheel issue
#628
illusional
closed
1 year ago
1
update to allow .tar files to be unzipped
#627
EddieLF
closed
1 year ago
3
Create copy_eh_to_analysis.sh
#626
hopedisastro
closed
1 year ago
0
Don't use deprecated download_as_string method
#625
lgruen
closed
1 year ago
0
Switch to chunked response encoding
#624
lgruen
closed
1 year ago
0
Create copy_female_calls.sh
#623
hopedisastro
closed
1 year ago
0
Create copy_mergedstr.sh
#622
hopedisastro
closed
1 year ago
0
Patch asyncio early
#621
lgruen
closed
1 year ago
0
Revert "Limit analysis-runner server workers to 1"
#620
lgruen
closed
1 year ago
0
argument to remove filtered rows
#619
MattWellie
closed
1 year ago
0
Limit analysis-runner server workers to 1
#618
lgruen
closed
1 year ago
0
Revert to Hail 0.2.105 for Dataproc once more
#617
lgruen
closed
1 year ago
0
Install botocore manually in Dataproc init script
#616
lgruen
closed
1 year ago
0
suppress infinite loop failure mode
#615
MattWellie
closed
1 year ago
0
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