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populationgenomics / metamist

Sample level metadata system
MIT License
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Add support for cohorts in create_test_subset script #813

Closed vivbak closed 3 months ago

vivbak commented 3 months ago

Closes https://github.com/populationgenomics/metamist/issues/770

Depends on https://github.com/populationgenomics/metamist/pull/815

Do not merge until the fix in https://github.com/populationgenomics/metamist/pull/815 has been merged.

In this PR we add support for custom cohorts in the create_test_subset script. This means a user can specify which cohort they'd like to make a copy of in the test project.

codecov-commenter commented 3 months ago

Codecov Report

All modified and coverable lines are covered by tests :white_check_mark:

Project coverage is 77.30%. Comparing base (b8121aa) to head (eb9b7e6).

Additional details and impacted files ```diff @@ Coverage Diff @@ ## dev #813 +/- ## ======================================= Coverage 77.30% 77.30% ======================================= Files 157 157 Lines 13010 13010 ======================================= Hits 10057 10057 Misses 2953 2953 ```

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