Improved neuron subtype model

pr4deepr / GutAnalysisToolbox

Analysis and characterisation of cells within the gut wall using deep learning models. The current focus is on studying enteric neurons and enteric glia.

https://gut-analysis-toolbox.gitbook.io/docs/

BSD 3-Clause "New" or "Revised" License

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Improved neuron subtype model #4

Closed pr4deepr closed 2 years ago

pr4deepr commented 2 years ago

Currently, the neuron subtype model is trained on both Hu and neuronal subtype annotations, and gives a lot of false positives. The subtype model should only be trained on neuron subtype and not on Hu.

To do:

[x] Annotate new images to generate more training and test data
[x] Train a new model
[x] Validate the model on test data

pr4deepr commented 2 years ago

New neuron subtype model v4 published and included.. Thanks to @lksoren for annotations..