Bioinformatics

This repository contains all software that requires knowledge of bioinformatics software, databases, and methods. The goal is to sequester the more detailed bioinformatic data handling in this repo, so that other code repos can simply use this repo as a black box.

23andme-imputation

This directory contains the 2018-era imputation pipeline. Not currently used.

terraform

This directory contains Terraform configuration for running the bioinformatics infrastructure.

packer

This directory contains Packer configuration for building bioinformatics machine images (AMIs).

ansible

This directory contains Ansible configuration for provisioning bioinformatics machines.