Update describe_data

[priviere]

• create sub-function that are called into PPBstats::describe_data, maybe go throught get_ggplot directly as it is only plot ? With the data in argument

  • describe_data_network :

  • create a standard input format : look at shinemas2R::is.get.data.output.R and appendix D of the vignette of shinemas2R

  • reformat code from shinemas2R functions

    • shinemas2R::get.ggplot.R & shinemas2R::get.ggplot_hide.labels.part.R that may be useful if we keep the format of the seed lots GERMPLASM_LOCATION_YEAR_DIGIT

    • shinemas2R::get.ggplot_plot.network.R and shinemas2R::get.ggplot_ggnet.custom.R But see https://briatte.github.io/ggnetwork/ => maybe better to go from here and forget shinemas2R::get.ggplot_plot.network.R and shinemas2R::get.ggplot_ggnet.custom.R functions ?

    • shinemas2R::get.ggplot_network.relation.barplot.R

    • shinemas2R::get.ggplot_network.relation.map.R

  • pie on network or map : reformat code from shinemas2R function shinemas2R::get.ggplot_pie.on.ggplot But maybe forgot it and look at other solutions : http://stackoverflow.com/questions/10368180/plotting-pie-graphs-on-map-in-ggplot http://rgraphgallery.blogspot.fr/2013/04/rg-plot-pie-over-google-map.html https://qdrsite.wordpress.com/2016/06/26/pies-on-a-map/

  • describe_data_agro :

  • reformat code from shinemas2R::get.ggplot_plot.it and PPBstats::describe_data in order to take into account data format of PPBstats (cf head(data_GxE) for example) Note that for SR and S must be linked to data_version in PPBstats

  • create plot with dynamic in time

[priviere]

for radar plot : cf https://github.com/ricardo-bion/ggradar

[priviere]

update workflow of function in the vignette conribution

[priviere]

close and split into #67 and #68