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prophyle
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prophasm
ProphAsm – a rapid computation of simplitigs directly from k-mer sets
MIT License
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Questions about algorithms written in python
#14
XieLeii
closed
1 year ago
2
Fixed pseudocode
#13
enricorox
closed
2 years ago
1
Advice for generating simplitigs from FASTQ files
#12
SionBayliss
opened
4 years ago
0
Recommended workflow for generating simplitigs from bacterial pangenomes
#11
SionBayliss
opened
4 years ago
0
Request: presence/absence matrix
#10
SionBayliss
opened
4 years ago
4
ProphAsm 0.1.2
#9
karel-brinda
opened
4 years ago
0
Too small variables
#8
karel-brinda
opened
5 years ago
0
Add additional metadata into sequence comments
#7
karel-brinda
opened
6 years ago
0
Add an option for marking branching nodes
#6
karel-brinda
opened
6 years ago
0
Fix testing using Travis
#5
karel-brinda
closed
6 years ago
0
Replace std by klib
#4
karel-brinda
opened
6 years ago
0
Add an option to keep only k-mers sufficiently frequent
#3
karel-brinda
opened
6 years ago
0
Add an option for freeing & reloading k-mer sets
#2
karel-brinda
opened
6 years ago
0
Print #kmers in the final message
#1
karel-brinda
opened
6 years ago
0