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qichao1984
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NCyc
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Question about NCyc_95.faa.gz vs NCyc_100.faa.gz
#40
pthieringer
opened
7 months ago
0
error when making blast db
#39
merytouceda
opened
11 months ago
0
Does it suitable for plant
#38
zhangwenda0518
opened
11 months ago
0
DNA sequence
#37
TKsh6
opened
1 year ago
2
NcycDB license?
#36
jpod1010
opened
1 year ago
0
diamond error "Please specify the location of diamond! at NCycProfiler.PL line 42."
#35
lluisbertrans
opened
1 year ago
4
diamond question
#34
XiaominF
opened
1 year ago
0
Mapping_file issues
#33
zh8008
opened
2 years ago
3
How do you generate the count tables?
#32
Rob-murphys
opened
2 years ago
2
Can Ncyc be used on eukaryotic genomes?
#31
Rob-murphys
opened
2 years ago
2
Can I combine output from multiple runs?
#30
Rob-murphys
opened
2 years ago
0
missing output file
#29
Rob-murphys
closed
2 years ago
9
set up blast in the conda environment
#28
laibinhuang
opened
2 years ago
0
What is what in the output?
#27
Rob-murphys
closed
2 years ago
0
Addition of HMMER/HMMSEARCH tool?
#26
Rob-murphys
opened
2 years ago
0
Can I specify a single input for -d so I can run in parallel
#25
Rob-murphys
opened
2 years ago
0
Is number of sequence just number of identified ORFs in the -si file?
#24
Rob-murphys
closed
2 years ago
3
classification using database
#23
laibinhuang
opened
2 years ago
5
Why do annotating the same functionality with different databases produce different results?
#22
xdli009
opened
2 years ago
1
Identifiers missing from id2gene.map.2019Jul
#21
bowmanjeffs
opened
2 years ago
2
what's the difference between the "NCyc_100_2019Jul" and "NCyc_100.faa"?
#20
dangchenyuan
opened
2 years ago
1
Where did my single hit of amoA_B go when my samples concatenated?
#19
MaryoHg
opened
3 years ago
6
more power
#18
mggrami
closed
3 years ago
2
Two files found as same file and not in si
#17
edisagarcia
opened
3 years ago
9
Getting the annotated gene/protein sequence
#16
ShailNair
opened
3 years ago
4
Format issue with -si file
#15
bgregs94
closed
3 years ago
8
Unsure how to get started...
#14
maracashay
opened
4 years ago
7
N-genes counts from contigs normalized by total reads is not good indicator of gene abundance
#13
jianshu93
opened
4 years ago
7
Output file not detected
#12
bishav6708
opened
4 years ago
4
-si file: There is always a missing sample name after alignment ending
#11
MaryoHg
closed
4 years ago
6
Cannot find diamond output
#10
ChristianFurbo
closed
4 years ago
2
Bug with system call 'blastall'
#9
lguangyu
opened
5 years ago
0
Incorrect parameters
#8
ajray34
opened
5 years ago
0
Three potential inaccurate issues to be confirmed
#7
liangjinsong
opened
5 years ago
5
Accession IDs of reference database
#6
rprops
opened
5 years ago
2
No diamond/usearch/blast files were detected!
#5
amansgill
opened
5 years ago
4
problem using code
#4
kashif89
closed
5 years ago
0
Output file
#3
nakeene
opened
5 years ago
1
comammox amoA?
#2
superhu0
opened
5 years ago
1
Script usage example
#1
rprops
closed
5 years ago
8